WormBase Tree Display for Gene: WBGene00018616
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| WBGene00018616 | SMap | S_parent | Sequence | F48G7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F48G7.5 | |||||||
| Molecular_name | F48G7.5 | ||||||||
| F48G7.5.1 | |||||||||
| CE48243 | |||||||||
| Other_name | CELE_F48G7.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F48G7.5 | ||||||||
| DB_info | Database | AceView | gene | 5B100 | |||||
| WormQTL | gene | WBGene00018616 | |||||||
| WormFlux | gene | WBGene00018616 | |||||||
| NDB | locus_tag | CELE_F48G7.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018616|UniProtKB=O44585 | |||||||
| family | PTHR46219 | ||||||||
| NCBI | gene | 178578 | |||||||
| RefSeq | protein | NM_070866.6 | |||||||
| TREEFAM | TREEFAM_ID | TF318899 | |||||||
| TrEMBL | UniProtAcc | O44585 | |||||||
| UniProt_GCRP | UniProtAcc | O44585 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00980856 | ||||||||
| WBVar00980857 | |||||||||
| WBVar00980858 | |||||||||
| WBVar00980859 | |||||||||
| WBVar00980860 | |||||||||
| WBVar00980861 | |||||||||
| WBVar02122634 | |||||||||
| WBVar01499528 | |||||||||
| WBVar00448181 | |||||||||
| WBVar00448182 | |||||||||
| WBVar01499167 | |||||||||
| WBVar01584153 | |||||||||
| WBVar01584154 | |||||||||
| WBVar02104065 | |||||||||
| WBVar02104066 | |||||||||
| WBVar02104067 | |||||||||
| WBVar01499740 | |||||||||
| WBVar02123401 | |||||||||
| WBVar00579936 | |||||||||
| WBVar00579937 | |||||||||
| WBVar00579938 | |||||||||
| WBVar00579939 | |||||||||
| WBVar00579940 | |||||||||
| WBVar01908684 | |||||||||
| WBVar01498849 | |||||||||
| WBVar01498850 | |||||||||
| WBVar01499775 | |||||||||
| WBVar02122151 | |||||||||
| WBVar02123844 | |||||||||
| WBVar01519753 | |||||||||
| WBVar01519754 | |||||||||
| WBVar01519755 | |||||||||
| WBVar01735614 | |||||||||
| WBVar01735615 | |||||||||
| WBVar01735616 | |||||||||
| WBVar01735617 | |||||||||
| WBVar02124037 | |||||||||
| WBVar01735618 | |||||||||
| WBVar01735619 | |||||||||
| WBVar02071100 | |||||||||
| WBVar01735620 | |||||||||
| WBVar01735621 | |||||||||
| WBVar01735622 | |||||||||
| WBVar01735623 | |||||||||
| WBVar01735624 | |||||||||
| WBVar01735625 | |||||||||
| WBVar01735626 | |||||||||
| WBVar01735627 | |||||||||
| WBVar01735628 | |||||||||
| WBVar01735629 | |||||||||
| WBVar01735630 | |||||||||
| WBVar01735631 | |||||||||
| WBVar02124605 | |||||||||
| WBVar01899178 | |||||||||
| WBVar01899179 | |||||||||
| WBVar01899180 | |||||||||
| WBVar01899181 | |||||||||
| WBVar01499674 | |||||||||
| WBVar01499675 | |||||||||
| WBVar00980854 | |||||||||
| WBVar01500066 | |||||||||
| WBVar00980855 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog (61) | |||||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-nine chemicals including Heme; 1-methylnicotinamide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F48G7.5 | |||||||
| Corresponding_CDS_history | F48G7.5:wp237 | ||||||||
| Corresponding_transcript | F48G7.5.1 | ||||||||
| Other_sequence | Oden_isotig07065 | ||||||||
| Oden_isotig07064 | |||||||||
| Oden_isotig07063 | |||||||||
| Hbac_isotig03427 | |||||||||
| FG975892.1 | |||||||||
| Oden_isotig07070 | |||||||||
| Oden_isotig07067 | |||||||||
| Oden_isotig07068 | |||||||||
| Oden_isotig07066 | |||||||||
| Oden_isotig07069 | |||||||||
| Associated_feature | WBsf652447 | ||||||||
| WBsf233276 | |||||||||
| WBsf233277 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00114465 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000400 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047776 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015272 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085725 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022097 | ||||||||
| Expr1151610 | |||||||||
| Expr2003899 | |||||||||
| Expr2022122 | |||||||||
| Drives_construct | WBCnstr00026381 | ||||||||
| Construct_product | WBCnstr00026381 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (226) | |||||||||
| Interaction | WBInteraction000101507 | ||||||||
| WBInteraction000150308 | |||||||||
| WBInteraction000261936 | |||||||||
| WBInteraction000345232 | |||||||||
| WBInteraction000364149 | |||||||||
| WBInteraction000419660 | |||||||||
| WBInteraction000424657 | |||||||||
| WBInteraction000427655 | |||||||||
| WBInteraction000450761 | |||||||||
| WBInteraction000456069 | |||||||||
| Map_info | Positive | Positive_clone | F48G7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -19.9731 | |||||||
| Method | Gene |
