WormBase Tree Display for Gene: WBGene00018491
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| WBGene00018491 | SMap | S_parent | Sequence | F46E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mdh-1 | Person_evidence | WBPerson676 | |||||
| Sequence_name | F46E10.10 | ||||||||
| Molecular_name | F46E10.10 | ||||||||
| F46E10.10.1 | |||||||||
| CE20820 | |||||||||
| Other_name | F46E10.g | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F46E10.10 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | mdh-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Aug 2010 11:15:35 | WBPerson2970 | Name_change | CGC_name | mdh-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mdh | ||||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Contained_in_operon | CEOP5120 | ||||||||
| Ortholog (42) | |||||||||
| Structured_description | Concise_description | mdh-1 encodes a malate dehydrogenase; by homology, MDH-1 is predicted to function to reversibly catalyze the formation of oxaloacetate from malate. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 26 Oct 2011 00:00:00 | ||||||||
| Automated_description | Enables L-malate dehydrogenase activity. Involved in malate metabolic process. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 88. Is an ortholog of human MDH1 (malate dehydrogenase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112222 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6970) | ||||
| Molecular_info | Corresponding_CDS | F46E10.10 | |||||||
| Corresponding_CDS_history | F46E10.10b:wp275 | ||||||||
| F46E10.10c:wp275 | |||||||||
| Corresponding_transcript | F46E10.10.1 | ||||||||
| Other_sequence (374) | |||||||||
| Associated_feature | WBsf655562 | ||||||||
| WBsf669059 | |||||||||
| WBsf981954 | |||||||||
| WBsf1000291 | |||||||||
| WBsf1000292 | |||||||||
| WBsf233819 | |||||||||
| WBsf233820 | |||||||||
| WBsf233821 | |||||||||
| WBsf233822 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015088 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00106994 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047523 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033295 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088638 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103124 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088745 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103123 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12927 | ||||||||
| Expr1023310 | |||||||||
| Expr1037971 | |||||||||
| Expr1151361 | |||||||||
| Expr2013465 | |||||||||
| Expr2031699 | |||||||||
| Drives_construct | WBCnstr00026475 | ||||||||
| Construct_product | WBCnstr00026475 | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction (52) | |||||||||
| WBProcess | WBbiopr:00000096 | ||||||||
| Map_info | Map | V | Position | 0.000662 | |||||
| Positive | Positive_clone | F46E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
