WormBase Tree Display for Gene: WBGene00018455
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| WBGene00018455 | SMap | S_parent | Sequence | F45D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-42 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F45D11.9 | ||||||||
| Molecular_name | F45D11.9 | ||||||||
| F45D11.9.1 | |||||||||
| CE43758 | |||||||||
| Other_name | CELE_F45D11.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-42 | ||||||||
| DB_info | Database | AceView | gene | 2B283 | |||||
| WormQTL | gene | WBGene00018455 | |||||||
| WormFlux | gene | WBGene00018455 | |||||||
| NDB | locus_tag | CELE_F45D11.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018455|UniProtKB=Q9N5T9 | |||||||
| family | PTHR31379 | ||||||||
| NCBI | gene | 185785 | |||||||
| RefSeq | protein | NM_001381319.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322489 | |||||||
| TrEMBL | UniProtAcc | Q9N5T9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5T9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-42 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (52) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g3259 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (49) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABprpapppa; Z1.p; germ line; male distal tip cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including bisphenol A; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45D11.9 | |||||||
| Corresponding_CDS_history | F45D11.9:wp203 | ||||||||
| Corresponding_transcript | F45D11.9.1 | ||||||||
| Associated_feature | WBsf986541 | ||||||||
| WBsf220812 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032292 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032291 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047378 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014996 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015826 | ||||||||
| Expr1151227 | |||||||||
| Expr2011726 | |||||||||
| Expr2029965 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (144) | |||||||||
| Map_info | Map | II | Position | -15.5754 | |||||
| Positive | Positive_clone | F45D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00062217 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
