WormBase Tree Display for Gene: WBGene00018455
expand all nodes | collapse all nodes | view schema
WBGene00018455 | SMap | S_parent | Sequence | F45D11 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | fbxc-42 | Person_evidence | WBPerson655 | |||
Sequence_name | F45D11.9 | ||||||
Molecular_name | F45D11.9 | ||||||
F45D11.9.1 | |||||||
CE43758 | |||||||
Other_name | CELE_F45D11.9 | Accession_evidence | NDB | BX284602 | |||
Public_name | fbxc-42 | ||||||
DB_info | Database | AceView | gene | 2B283 | |||
WormQTL | gene | WBGene00018455 | |||||
WormFlux | gene | WBGene00018455 | |||||
NDB | locus_tag | CELE_F45D11.9 | |||||
Panther | gene | CAEEL|WormBase=WBGene00018455|UniProtKB=Q9N5T9 | |||||
family | PTHR31379 | ||||||
NCBI | gene | 185785 | |||||
RefSeq | protein | NM_001381319.1 | |||||
TREEFAM | TREEFAM_ID | TF322489 | |||||
TrEMBL | UniProtAcc | Q9N5T9 | |||||
UniProt_GCRP | UniProtAcc | Q9N5T9 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxc | ||||||
Allele (52) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | chrII_pilon.g3259 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Paralog (49) | |||||||
Structured_description | Automated_description | Enriched in several structures, including ABprpapppa; Z1.p; germ line; male distal tip cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including bisphenol A; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F45D11.9 | |||||
Corresponding_CDS_history | F45D11.9:wp203 | ||||||
Corresponding_transcript | F45D11.9.1 | ||||||
Associated_feature | WBsf986541 | ||||||
WBsf220812 | |||||||
Experimental_info | RNAi_result | WBRNAi00032292 | Inferred_automatically | RNAi_primary | |||
WBRNAi00032291 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047378 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014996 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1015826 | ||||||
Expr1151227 | |||||||
Expr2011726 | |||||||
Expr2029965 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (144) | |||||||
Map_info | Map | II | Position | -15.5754 | |||
Positive | Positive_clone | F45D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00062217 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |