WormBase Tree Display for Gene: WBGene00018393
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| WBGene00018393 | SMap | S_parent | Sequence | F43E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | msra-1 | Paper_evidence | WBPaper00002467 | |||||
| Person_evidence | WBPerson1279 | ||||||||
| Sequence_name | F43E2.5 | ||||||||
| Molecular_name | F43E2.5 | ||||||||
| F43E2.5.1 | |||||||||
| CE07241 | |||||||||
| Other_name | CELE_F43E2.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | msra-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Oct 2008 10:23:18 | WBPerson2970 | Name_change | CGC_name | msra-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | msra | ||||||||
| Allele (14) | |||||||||
| Strain | WBStrain00000199 | ||||||||
| WBStrain00000198 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00026495 | ||||||||
| 00026496 | |||||||||
| 00026497 | |||||||||
| 00026498 | |||||||||
| 00026499 | |||||||||
| 00026500 | |||||||||
| 00026501 | |||||||||
| 00026502 | |||||||||
| 00026503 | |||||||||
| 00123521 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00018419 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | msra-1 encodes a methionine sulfoxide-S-reductase (MsrA) with experimentally confirmed activity. | Paper_evidence | WBPaper00024679 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 08 Oct 2008 00:00:00 | ||||||||
| Automated_description | Enables L-methionine:thioredoxin-disulfide S-oxidoreductase activity and peptide-methionine (S)-S-oxide reductase activity. Involved in obsolete oxidation-reduction process. Predicted to be located in cytoplasm. Expressed in hypodermis and neurons. Is an ortholog of human MSRA (methionine sulfoxide reductase A). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F43E2.5 | |||||||
| Corresponding_transcript | F43E2.5.1 | ||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf650224 | ||||||||
| WBsf650225 | |||||||||
| WBsf650226 | |||||||||
| WBsf665217 | |||||||||
| WBsf223330 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00102156 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00102155 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047199 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014883 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8799 | ||||||||
| Expr1023466 | |||||||||
| Expr1037922 | |||||||||
| Expr1151060 | |||||||||
| Expr2013793 | |||||||||
| Expr2032031 | |||||||||
| Drives_construct | WBCnstr00013531 | ||||||||
| WBCnstr00026556 | |||||||||
| Construct_product | WBCnstr00013531 | ||||||||
| WBCnstr00026556 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (326) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Map | II | Position | 0.502778 | Error | 1.4e-05 | |||
| Positive | Positive_clone | F43E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
