WormBase Tree Display for Gene: WBGene00018362
expand all nodes | collapse all nodes | view schema
| WBGene00018362 | SMap | S_parent | Sequence | F42G9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ppm-1.G | Laboratory_evidence | GNW | |||||
| Sequence_name | F42G9.1 | ||||||||
| Molecular_name | F42G9.1a | ||||||||
| F42G9.1a.1 | |||||||||
| CE07231 | |||||||||
| F42G9.1b | |||||||||
| CE30788 | |||||||||
| F42G9.1b.1 | |||||||||
| Other_name | CELE_F42G9.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ppm-1.G | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 24 May 2018 17:10:07 | WBPerson1983 | Name_change | CGC_name | ppm-1.G | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ppm | ||||||||
| Allele (47) | |||||||||
| Strain | WBStrain00002761 | ||||||||
| WBStrain00031466 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00047206 | ||||||||
| 00047207 | |||||||||
| 00047208 | |||||||||
| 00047209 | |||||||||
| 00047210 | |||||||||
| 00047211 | |||||||||
| 00047212 | |||||||||
| 00123498 | |||||||||
| 00123499 | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00001412 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00006460 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009354 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011953 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00016580 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022832 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021856 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006524 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity and myosin phosphatase activity. Expressed in gonad and head. Is an ortholog of human PPM1G (protein phosphatase, Mg2+/Mn2+ dependent 1G). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42G9.1a | |||||||
| F42G9.1b | |||||||||
| Corresponding_transcript | F42G9.1a.1 | ||||||||
| F42G9.1b.1 | |||||||||
| Other_sequence (53) | |||||||||
| Associated_feature | WBsf644924 | ||||||||
| WBsf644925 | |||||||||
| WBsf224394 | |||||||||
| WBsf224395 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014848 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047132 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032156 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094196 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006524 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4015 | ||||||||
| Expr6053 | |||||||||
| Expr1013486 | |||||||||
| Expr1037909 | |||||||||
| Expr1151000 | |||||||||
| Expr2003653 | |||||||||
| Expr2021872 | |||||||||
| Drives_construct | WBCnstr00003289 | ||||||||
| WBCnstr00026580 | |||||||||
| Construct_product | WBCnstr00026580 | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (158) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Map | III | Position | -26.0335 | |||||
| Positive | Positive_clone | F42G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00015003 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
