WormBase Tree Display for Gene: WBGene00018353
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WBGene00018353 | SMap | S_parent | Sequence | F42G2 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | fbxa | |||||
Allele (159) | ||||||
Strain | WBStrain00047576 | |||||
RNASeq_FPKM (74) | ||||||
Ortholog (29) | ||||||
Paralog (219) | ||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | ||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Enriched in RICL; RICR; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty chemicals including 1-methylnicotinamide; methylmercuric chloride; and D-glucopyranose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F42G2.4 | ||||
Corresponding_CDS_history | F42G2.4:wp274 | |||||
F42G2.4a:wp125 | ||||||
F42G2.4a:wp151 | ||||||
F42G2.4b:wp125 | ||||||
F42G2.4b:wp151 | ||||||
Corresponding_transcript | F42G2.4.1 | |||||
Associated_feature | WBsf665396 | |||||
WBsf222764 | ||||||
Experimental_info | RNAi_result | WBRNAi00014834 | Inferred_automatically | RNAi_primary | ||
WBRNAi00047113 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1021429 | |||||
Expr1150980 | ||||||
Expr2011502 | ||||||
Expr2029739 | ||||||
Drives_construct | WBCnstr00026587 | |||||
Construct_product | WBCnstr00026587 | |||||
Microarray_results (15) | ||||||
Expression_cluster (230) | ||||||
Interaction (27) | ||||||
Map_info (3) | ||||||
Reference | WBPaper00012854 | |||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |