WormBase Tree Display for Gene: WBGene00018353
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WBGene00018353 | SMap | S_parent | Sequence | F42G2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxa-182 | Person_evidence | WBPerson655 | |||||
Sequence_name | F42G2.4 | ||||||||
Molecular_name | F42G2.4 | ||||||||
F42G2.4.1 | |||||||||
CE53955 | |||||||||
Other_name | CELE_F42G2.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | fbxa-182 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00018353 | |||||
WormFlux | gene | WBGene00018353 | |||||||
NDB | locus_tag | CELE_F42G2.4 | |||||||
NCBI | gene | 173594 | |||||||
RefSeq | protein | NM_001377723.1 | |||||||
TREEFAM | TREEFAM_ID | TF322500 | |||||||
TrEMBL | UniProtAcc | Q6HAE7 | |||||||
UniProt_GCRP | UniProtAcc | Q6HAE7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-182 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxa | ||||||||
Allele (159) | |||||||||
Strain | WBStrain00047576 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (29) | |||||||||
Paralog (219) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in RICL; RICR; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty chemicals including 1-methylnicotinamide; methylmercuric chloride; and D-glucopyranose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F42G2.4 | |||||||
Corresponding_CDS_history | F42G2.4:wp274 | ||||||||
F42G2.4a:wp125 | |||||||||
F42G2.4a:wp151 | |||||||||
F42G2.4b:wp125 | |||||||||
F42G2.4b:wp151 | |||||||||
Corresponding_transcript | F42G2.4.1 | ||||||||
Associated_feature | WBsf665396 | ||||||||
WBsf222764 | |||||||||
Experimental_info | RNAi_result (2) | ||||||||
Expr_pattern (4) | |||||||||
Drives_construct | WBCnstr00026587 | ||||||||
Construct_product | WBCnstr00026587 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (230) | |||||||||
Interaction (27) | |||||||||
Map_info | Map | II | Position | -13.8292 | Error | 0.00069 | |||
Positive | Positive_clone | F42G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00012854 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |