WormBase Tree Display for Gene: WBGene00018353

WBGene00018353 SMap: S_parent: Sequence: F42G2
  Identity: Version: 2
    Name: CGC_name: fbxa-182 Person_evidence: WBPerson655
      Sequence_name: F42G2.4
      Molecular_name: F42G2.4
        F42G2.4.1
        CE53955
      Other_name: CELE_F42G2.4 Accession_evidence: NDB BX284602
      Public_name: fbxa-182
    DB_info: Database: WormQTL gene WBGene00018353
        WormFlux gene WBGene00018353
        NDB locus_tag CELE_F42G2.4
        NCBI gene 173594
        RefSeq protein NM_001377723.1
        TREEFAM TREEFAM_ID TF322500
        TrEMBL UniProtAcc Q6HAE7
        UniProt_GCRP UniProtAcc Q6HAE7
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 01 Mar 2007 11:55:19 WBPerson2970 Name_change: CGC_name: fbxa-182
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele: WBVar02152990 Inferred_automatically: From strain object: VC4135
      WBVar00711782
      WBVar00711783
      WBVar00711784
      WBVar01499702
      WBVar00711785
      WBVar00711786
      WBVar00711787
      WBVar00711788
      WBVar02123182
      WBVar00711789
      WBVar01232801
      WBVar00711790
      WBVar01232802
      WBVar00711791
      WBVar02120608
      WBVar01232803
      WBVar00711792
      WBVar01685225
      WBVar00711793
      WBVar01685226
      WBVar02111225
      WBVar00711794
      WBVar01685227
      WBVar00711795
      WBVar01232809
      WBVar00711796
      WBVar01232813
      WBVar00711797
      WBVar00711798
      WBVar01232814
      WBVar02123007
      WBVar01232815
      WBVar00711799
      WBVar02121537
      WBVar00711800
      WBVar01232817
      WBVar02108654
      WBVar00711801
      WBVar02108655
      WBVar00711802
      WBVar00711803
      WBVar02108656
      WBVar00711804
      WBVar01363612
      WBVar02121362
      WBVar01500106
      WBVar02100576
      WBVar02122298
      WBVar01497905
      WBVar02124326
      WBVar01536115
      WBVar01691926
      WBVar01404295
      WBVar02121946
      WBVar01718498
      WBVar02078314
      WBVar01298594
      WBVar01298595
      WBVar00167024
      WBVar00167025
      WBVar01363737
      WBVar00167026
      WBVar00167027
      WBVar01363743
      WBVar02112388
      WBVar02035436
      WBVar00167028
      WBVar01363749
      WBVar00167029
      WBVar01363750
      WBVar00167030
      WBVar00167031
      WBVar00546548
      WBVar01764581
      WBVar00546549
      WBVar02093815
      WBVar02122527
      WBVar01789914
      WBVar01789915
      WBVar01789916
      WBVar01789917
      WBVar01789918
      WBVar01789919
      WBVar02117197
      WBVar01789920
      WBVar00257537
      WBVar01789921
      WBVar00257539
      WBVar01789922
      WBVar01789923
      WBVar01789924
      WBVar02122908
      WBVar01789925
      WBVar01789926
      WBVar01789927
      WBVar01789928
      WBVar01789929
      WBVar01789930
      WBVar01576486
      WBVar01576487
      WBVar01576488
      WBVar01576489
      WBVar02145323
      WBVar01641818
      WBVar01576490
      WBVar01705456
      WBVar01641819
      WBVar01576491
      WBVar01576492
      WBVar01576493
      WBVar01576494
      WBVar01576495
      WBVar01576496
      WBVar02111517
      WBVar00359241
      WBVar00359242
      WBVar00359243
      WBVar00359244
      WBVar00359245
      WBVar00359246
      WBVar00359247
      WBVar00359248
      WBVar00359249
      WBVar00359250
      WBVar02122214
      WBVar00359251
      WBVar02089090
      WBVar00359252
      WBVar01933829
      WBVar01933830
      WBVar02121124
      WBVar01603457
      WBVar01603458
      WBVar01993878
      WBVar01603459
      WBVar01603460
      WBVar01603461
      WBVar01603462
      WBVar02092058
      WBVar01603463
      WBVar02092059
      WBVar02076739
      WBVar01603464
      WBVar01603465
      WBVar01625242
      WBVar02092060
      WBVar01625243
      WBVar01603466
      WBVar01625244
      WBVar01625245
      WBVar01625246
      WBVar02123354
      WBVar02124091
      WBVar00711778
      WBVar02120779
      WBVar00711779
      WBVar00711780
      WBVar00711781
    Strain: WBStrain00047576
    RNASeq_FPKM (74)
    Ortholog (29)
    Paralog (219)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in RICL; RICR; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty chemicals including 1-methylnicotinamide; methylmercuric chloride; and D-glucopyranose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F42G2.4
    Corresponding_CDS_history: F42G2.4:wp274
      F42G2.4a:wp125
      F42G2.4a:wp151
      F42G2.4b:wp125
      F42G2.4b:wp151
    Corresponding_transcript: F42G2.4.1
    Associated_feature: WBsf665396
      WBsf222764
  Experimental_info: RNAi_result: WBRNAi00014834 Inferred_automatically: RNAi_primary
      WBRNAi00047113 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021429
      Expr1150980
      Expr2011502
      Expr2029739
    Drives_construct: WBCnstr00026587
    Construct_product: WBCnstr00026587
    Microarray_results (15)
    Expression_cluster (230)
    Interaction (27)
  Map_info: Map: II Position: -13.8292 Error: 0.00069
    Positive: Positive_clone: F42G2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene