WormBase Tree Display for Gene: WBGene00018300
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WBGene00018300 | SMap | S_parent | Sequence | F41G3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | F41G3.3 | |||||||
Molecular_name (6) | |||||||||
Other_name | CELE_F41G3.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F41G3.3 | ||||||||
DB_info | Database | AceView | gene | 2H49 | |||||
WormQTL | gene | WBGene00018300 | |||||||
WormFlux | gene | WBGene00018300 | |||||||
NDB | locus_tag | CELE_F41G3.3 | |||||||
NCBI | gene | 174113 | |||||||
RefSeq | protein | NM_062981.4 | |||||||
NM_062982.6 | |||||||||
TrEMBL | UniProtAcc | Q20292 | |||||||
A0A6V7QYP1 | |||||||||
UniProt_GCRP | UniProtAcc | A0A6V7QYP1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 13 Jul 2020 10:58:32 | WBPerson4025 | Event | Acquires_merge | WBGene00018299 | ||||
Acquires_merge | WBGene00018299 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (91) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (27) | |||||||||
Structured_description | Automated_description | Enriched in g2L; g2R; pharyngeal-intestinal valve; pm6; and pm7 based on single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on tiling array; microarray; RNA-seq; and proteomic studies. Is affected by seventeen chemicals including methylmercuric chloride; stavudine; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F41G3.3a | |||||||
F41G3.3b | |||||||||
Corresponding_CDS_history | F41G3.3:wp261 | ||||||||
Corresponding_transcript | F41G3.3a.1 | ||||||||
F41G3.3b.1 | |||||||||
Other_sequence | MH01352 | ||||||||
CJC01780_1 | |||||||||
Associated_feature | WBsf644322 | ||||||||
WBsf988241 | |||||||||
WBsf988242 | |||||||||
WBsf988243 | |||||||||
WBsf1012419 | |||||||||
Experimental_info | RNAi_result | WBRNAi00014769 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047022 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00047021 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00014770 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013187 | ||||||||
Expr1021741 | |||||||||
Expr1037881 | |||||||||
Expr1037882 | |||||||||
Expr1150889 | |||||||||
Expr1150892 | |||||||||
Expr2003605 | |||||||||
Expr2003606 | |||||||||
Expr2021823 | |||||||||
Expr2021824 | |||||||||
Drives_construct | WBCnstr00026627 | ||||||||
Construct_product | WBCnstr00026627 | ||||||||
Microarray_results (38) | |||||||||
Expression_cluster (139) | |||||||||
SAGE_tag | SAGE:catttgaggttggtaag | Strand | Antisense | ||||||
SAGE:atcatcgttcacaagac | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:atcttccgga | Strand | Antisense | |||||||
SAGE:gatatgacgatgaagag | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:aggaagagcacacaagt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:acttttgtca | Strand | Antisense | |||||||
SAGE:tttaaaatcgcgtcatt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:agagcaaatcaacaaca | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:caccaaagtt | Strand | Antisense | |||||||
SAGE:atcatcgttc | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (13) | |||||||||
Map_info | Positive | Positive_clone | F41G3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 0.0855938 | |||||||
Reference | WBPaper00034471 | ||||||||
WBPaper00064898 | |||||||||
Method | Gene |