WormBase Tree Display for Gene: WBGene00018236

WBGene00018236 SMap: S_parent: Sequence: F40F4
  Identity: Version: 2
    Name: CGC_name: fbxb-71 Person_evidence: WBPerson655
      Sequence_name: F40F4.1
      Molecular_name: F40F4.1
        F40F4.1.1
        CE51237
      Other_name: CELE_F40F4.1 Accession_evidence: NDB BX284606
      Public_name: fbxb-71
    DB_info: Database: AceView gene XD883
        WormQTL gene WBGene00018236
        WormFlux gene WBGene00018236
        NDB locus_tag CELE_F40F4.1
        Panther gene CAEEL|WormBase=WBGene00018236|UniProtKB=Q20225
          family PTHR22899
        NCBI gene 180618
        RefSeq protein NM_001322617.3
        TrEMBL UniProtAcc Q20225
        UniProt_GCRP UniProtAcc Q20225
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-71
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (20)
    RNASeq_FPKM (74)
    Ortholog (30)
    Paralog (143)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABarpapaaa; ABplaaaaaa; ABplpaaaaa; ABplpaaapa; and amphid neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and let-60 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including Mercuric Chloride; multi-walled carbon nanotube; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F40F4.1
    Corresponding_CDS_history: F40F4.1:wp252
    Corresponding_transcript: F40F4.1.1
    Associated_feature: WBsf647928
      WBsf647929
      WBsf647930
      WBsf662296
      WBsf1004571
      WBsf235465
  Experimental_info: RNAi_result: WBRNAi00014655 Inferred_automatically: RNAi_primary
      WBRNAi00032030 Inferred_automatically: RNAi_primary
      WBRNAi00046863 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1037852
      Expr1150730
      Expr2011673
      Expr2029912
    Drives_construct: WBCnstr00026676
    Construct_product: WBCnstr00026676
    Microarray_results (15)
    Expression_cluster (126)
    Interaction (170)
  Map_info: Map: X Position: -10.6338
    Positive: Positive_clone: F40F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene