WormBase Tree Display for Gene: WBGene00018195
expand all nodes | collapse all nodes | view schema
| WBGene00018195 | SMap | S_parent | Sequence | F39E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | btb-16 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F39E9.2 | ||||||||
| Molecular_name | F39E9.2 | ||||||||
| F39E9.2.1 | |||||||||
| CE32655 | |||||||||
| Other_name | CELE_F39E9.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | btb-16 | ||||||||
| DB_info | Database | AceView | gene | 2D587 | |||||
| WormQTL | gene | WBGene00018195 | |||||||
| WormFlux | gene | WBGene00018195 | |||||||
| NDB | locus_tag | CELE_F39E9.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018195|UniProtKB=O17112 | |||||||
| family | PTHR22744 | ||||||||
| NCBI | gene | 173674 | |||||||
| RefSeq | protein | NM_062098.6 | |||||||
| TREEFAM | TREEFAM_ID | TF322195 | |||||||
| TrEMBL | UniProtAcc | O17112 | |||||||
| UniProt_GCRP | UniProtAcc | O17112 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Nov 2007 11:51:23 | WBPerson2970 | Name_change | CGC_name | btb-16 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | btb | ||||||||
| Allele | WBVar00361316 | ||||||||
| WBVar00361317 | |||||||||
| WBVar01499702 | |||||||||
| WBVar02120786 | |||||||||
| WBVar00548191 | |||||||||
| WBVar00718057 | |||||||||
| WBVar00718058 | |||||||||
| WBVar02075834 | |||||||||
| WBVar00718059 | |||||||||
| WBVar02123186 | |||||||||
| WBVar00718060 | |||||||||
| WBVar02075835 | |||||||||
| WBVar00718061 | |||||||||
| WBVar00718062 | |||||||||
| WBVar00718063 | |||||||||
| WBVar00718064 | |||||||||
| WBVar00718065 | |||||||||
| WBVar02121721 | |||||||||
| WBVar00718066 | |||||||||
| WBVar00718067 | |||||||||
| WBVar02120617 | |||||||||
| WBVar01498435 | |||||||||
| WBVar02124673 | |||||||||
| WBVar02122098 | |||||||||
| WBVar02121546 | |||||||||
| WBVar02123019 | |||||||||
| WBVar02121370 | |||||||||
| WBVar01500106 | |||||||||
| WBVar01790969 | |||||||||
| WBVar02124872 | |||||||||
| WBVar01790970 | |||||||||
| WBVar02120456 | |||||||||
| WBVar01790971 | |||||||||
| WBVar02075123 | |||||||||
| WBVar02122302 | |||||||||
| WBVar01367177 | |||||||||
| WBVar02121950 | |||||||||
| WBVar02080928 | |||||||||
| WBVar01504205 | |||||||||
| WBVar00602229 | |||||||||
| WBVar02122532 | |||||||||
| WBVar02122355 | |||||||||
| WBVar00169025 | |||||||||
| WBVar00169026 | |||||||||
| WBVar00169027 | |||||||||
| WBVar02122914 | |||||||||
| WBVar00169028 | |||||||||
| WBVar00169029 | |||||||||
| WBVar00169030 | |||||||||
| WBVar00169031 | |||||||||
| WBVar02124390 | |||||||||
| WBVar02123659 | |||||||||
| WBVar02124763 | |||||||||
| WBVar01235910 | |||||||||
| WBVar01500024 | |||||||||
| WBVar01235912 | |||||||||
| WBVar01235913 | |||||||||
| WBVar01500025 | |||||||||
| WBVar01235914 | |||||||||
| WBVar01982373 | |||||||||
| WBVar01235915 | |||||||||
| WBVar01235916 | |||||||||
| WBVar02120928 | |||||||||
| WBVar01235919 | |||||||||
| WBVar02122218 | |||||||||
| WBVar01235920 | |||||||||
| WBVar01235922 | |||||||||
| WBVar01245006 | |||||||||
| WBVar01245017 | |||||||||
| WBVar02122780 | |||||||||
| WBVar02121131 | |||||||||
| WBVar01301977 | |||||||||
| WBVar01916184 | |||||||||
| WBVar00361314 | |||||||||
| WBVar00361315 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (152) | |||||||||
| Paralog (29) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarppaapp; ABarpppapp; dopaminergic neurons; head mesodermal cell; and mechanosensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including Tunicamycin; mianserin; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F39E9.2 | |||||||
| Corresponding_CDS_history | F39E9.2:wp88 | ||||||||
| Corresponding_transcript | F39E9.2.1 | ||||||||
| Other_sequence | CR01799 | ||||||||
| CRC03531_1 | |||||||||
| Associated_feature | WBsf644049 | ||||||||
| WBsf220998 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046776 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014601 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097119 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1150651 | ||||||||
| Expr2009665 | |||||||||
| Expr2027904 | |||||||||
| Drives_construct | WBCnstr00026708 | ||||||||
| Construct_product | WBCnstr00026708 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (241) | |||||||||
| Interaction (155) | |||||||||
| Map_info | Map | II | Position | -6.84748 | Error | 0.016437 | |||
| Positive | Positive_clone | F39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065331 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
