WormBase Tree Display for Gene: WBGene00018172
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| WBGene00018172 | SMap | S_parent | Sequence | F38B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F38B6.2 | |||||||
| Molecular_name | F38B6.2 | ||||||||
| F38B6.2.1 | |||||||||
| CE45999 | |||||||||
| Other_name | CELE_F38B6.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F38B6.2 | ||||||||
| DB_info | Database | AceView | gene | XH315 | |||||
| WormQTL | gene | WBGene00018172 | |||||||
| WormFlux | gene | WBGene00018172 | |||||||
| NDB | locus_tag | CELE_F38B6.2 | |||||||
| NCBI | gene | 185452 | |||||||
| RefSeq | protein | NM_076725.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322014 | |||||||
| TrEMBL | UniProtAcc | F5GU48 | |||||||
| UniProt_GCRP | UniProtAcc | F5GU48 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Apr 2011 14:16:11 | WBPerson1849 | Event | Acquires_merge | WBGene00018171 | ||||
| Acquires_merge | WBGene00018171 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (39) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00018176 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in cholinergic neurons; mechanosensory neurons; pharyngeal-intestinal valve; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including Zidovudine; Rifampin; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F38B6.2 | |||||||
| Corresponding_CDS_history | F38B6.2:wp225 | ||||||||
| Corresponding_transcript | F38B6.2.1 | ||||||||
| Other_sequence | Tcol_isotig22934 | ||||||||
| Associated_feature | WBsf648251 | ||||||||
| WBsf1005618 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014540 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031948 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046686 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046685 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031949 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014541 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026391 | ||||||||
| Expr1037826 | |||||||||
| Expr1150564 | |||||||||
| Expr2003467 | |||||||||
| Expr2021682 | |||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction (54) | |||||||||
| Map_info | Positive | Positive_clone | F38B6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -2.55911 | |||||||
| Method | Gene |
