WormBase Tree Display for Gene: WBGene00018172
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WBGene00018172 | SMap | S_parent | Sequence | F38B6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | F38B6.2 | |||||
Molecular_name | F38B6.2 | ||||||
F38B6.2.1 | |||||||
CE45999 | |||||||
Other_name | CELE_F38B6.2 | Accession_evidence | NDB | BX284606 | |||
Public_name | F38B6.2 | ||||||
DB_info | Database | AceView | gene | XH315 | |||
WormQTL | gene | WBGene00018172 | |||||
WormFlux | gene | WBGene00018172 | |||||
NDB | locus_tag | CELE_F38B6.2 | |||||
NCBI | gene | 185452 | |||||
RefSeq | protein | NM_076725.5 | |||||
TREEFAM | TREEFAM_ID | TF322014 | |||||
TrEMBL | UniProtAcc | F5GU48 | |||||
UniProt_GCRP | UniProtAcc | F5GU48 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (39) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (22) | |||||||
Paralog | WBGene00018176 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enriched in cholinergic neurons; mechanosensory neurons; pharyngeal-intestinal valve; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including Zidovudine; Rifampin; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F38B6.2 | |||||
Corresponding_CDS_history | F38B6.2:wp225 | ||||||
Corresponding_transcript | F38B6.2.1 | ||||||
Other_sequence | Tcol_isotig22934 | ||||||
Associated_feature | WBsf648251 | ||||||
WBsf1005618 | |||||||
Experimental_info | RNAi_result | WBRNAi00014540 | Inferred_automatically | RNAi_primary | |||
WBRNAi00031948 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046686 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046685 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031949 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014541 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1026391 | ||||||
Expr1037826 | |||||||
Expr1150564 | |||||||
Expr2003467 | |||||||
Expr2021682 | |||||||
Microarray_results (31) | |||||||
Expression_cluster (130) | |||||||
Interaction (54) | |||||||
Map_info | Positive | Positive_clone | F38B6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | X | -2.55911 | |||||
Method | Gene |