WormBase Tree Display for Gene: WBGene00018145
expand all nodes | collapse all nodes | view schema
| WBGene00018145 | SMap | S_parent | Sequence | F37C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F37C4.5 | |||||||
| Molecular_name | F37C4.5a | ||||||||
| F37C4.5a.1 | |||||||||
| CE17048 | |||||||||
| F37C4.5b | |||||||||
| CE33640 | |||||||||
| F37C4.5b.1 | |||||||||
| Other_name | CELE_F37C4.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F37C4.5 | ||||||||
| DB_info | Database | AceView | gene | 4E638 | |||||
| WormQTL | gene | WBGene00018145 | |||||||
| WormFlux | gene | WBGene00018145 | |||||||
| NDB | locus_tag | CELE_F37C4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018145|UniProtKB=O44400 | |||||||
| family | PTHR31005 | ||||||||
| NCBI | gene | 177146 | |||||||
| RefSeq | protein | NM_001028014.5 | |||||||
| NM_001380170.1 | |||||||||
| SwissProt | UniProtAcc | O44400 | |||||||
| TREEFAM | TREEFAM_ID | TF316116 | |||||||
| UniProt_GCRP | UniProtAcc | O44400 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00094453 | Inferred_automatically | From strain object: RB2494 | ||||||
| WBVar00901318 | |||||||||
| WBVar00901319 | |||||||||
| WBVar00901320 | |||||||||
| WBVar00901321 | |||||||||
| WBVar00901322 | |||||||||
| WBVar00901323 | |||||||||
| WBVar00901324 | |||||||||
| WBVar00901325 | |||||||||
| WBVar00901326 | |||||||||
| WBVar00901327 | |||||||||
| WBVar00901328 | |||||||||
| WBVar00901329 | |||||||||
| WBVar00901330 | |||||||||
| WBVar00901331 | |||||||||
| WBVar00901332 | |||||||||
| WBVar00901333 | |||||||||
| WBVar01499790 | |||||||||
| WBVar02069790 | |||||||||
| WBVar01499633 | |||||||||
| WBVar01990782 | |||||||||
| WBVar00422164 | |||||||||
| WBVar00422165 | |||||||||
| WBVar00422166 | |||||||||
| WBVar00422167 | |||||||||
| WBVar00422168 | |||||||||
| WBVar00422169 | |||||||||
| WBVar02133660 | |||||||||
| WBVar01580801 | |||||||||
| WBVar01668632 | |||||||||
| WBVar01668633 | |||||||||
| Strain | WBStrain00033169 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00032262 | ||||||||
| 00032263 | |||||||||
| 00032264 | |||||||||
| Ortholog (51) | |||||||||
| Paralog | WBGene00011557 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00016877 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022847 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022848 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including head mesodermal cell; neurons; rectal gland cell; retrovesicular ganglion; and somatic gonad precursor based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on proteomic; RNA-seq; tiling array; and microarray studies. Is affected by twenty-one chemicals including 1-methylnicotinamide; D-glucose; and stavudine based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4139); Domain of unknown function DUF4139; and Conserved hypothetical protein CHP02231. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F37C4.5a | |||||||
| F37C4.5b | |||||||||
| Corresponding_transcript | F37C4.5a.1 | ||||||||
| F37C4.5b.1 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf651715 | ||||||||
| WBsf981728 | |||||||||
| WBsf996117 | |||||||||
| WBsf229925 | |||||||||
| WBsf229926 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046634 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014504 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033250 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011819 | ||||||||
| Expr1037814 | |||||||||
| Expr1150506 | |||||||||
| Expr2003441 | |||||||||
| Expr2021656 | |||||||||
| Drives_construct | WBCnstr00026747 | ||||||||
| Construct_product | WBCnstr00026747 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (254) | |||||||||
| Interaction (98) | |||||||||
| Map_info | Positive | Positive_clone | F37C4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -2.017 | |||||||
| Reference | WBPaper00049828 | ||||||||
| WBPaper00059605 | |||||||||
| WBPaper00061615 | |||||||||
| WBPaper00064064 | |||||||||
| WBPaper00065181 | |||||||||
| Method | Gene |
