WormBase Tree Display for Gene: WBGene00017960

WBGene00017960 SMap: S_parent: Sequence: F31F4
  Identity: Version: 1
    Name: Sequence_name: F31F4.11
      Molecular_name: F31F4.11a
        F31F4.11a.1
        CE44433
        F31F4.11b
        CE50776
        F31F4.11b.1
      Other_name: CELE_F31F4.11 Accession_evidence: NDB BX284605
      Public_name: F31F4.11
    DB_info: Database: AceView gene 5B140
        WormQTL gene WBGene00017960
        WormFlux gene WBGene00017960
        NDB locus_tag CELE_F31F4.11
        Panther gene CAEEL|WormBase=WBGene00017960|UniProtKB=O17129
          family PTHR22898
        NCBI gene 185169
        RefSeq protein NM_001313160.3
            NM_070883.6
        TrEMBL UniProtAcc O17129
            A0A0K3AXR8
        UniProt_GCRP UniProtAcc O17129
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (104)
    RNASeq_FPKM (74)
    GO_annotation: 00001620
      00001621
      00001622
      00001623
      00123222
      00123223
      00123224
    Ortholog (45)
    Paralog (23)
    Structured_description: Automated_description: Predicted to enable galactoside 2-alpha-L-fucosyltransferase activity. Predicted to be involved in macromolecule glycosylation. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F31F4.11a
      F31F4.11b
    Corresponding_CDS_history: F31F4.11:wp107
      F31F4.11:wp188
      F31F4.11:wp210
    Corresponding_transcript: F31F4.11a.1
      F31F4.11b.1
    Associated_feature: WBsf668715
      WBsf233282
      WBsf233283
  Experimental_info: RNAi_result: WBRNAi00014162 Inferred_automatically: RNAi_primary
      WBRNAi00031631 Inferred_automatically: RNAi_primary
      WBRNAi00046038 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014408
      Expr1149932
      Expr2003190
    Drives_construct: WBCnstr00026886
    Construct_product: WBCnstr00026886
    Microarray_results (16)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038168:lin-15B(n744)_downregulated
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045316:prg-1_upregulated_L3
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053402:cco-1(RNAi)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
      WBPaper00058969:RIS_depleted
      WBPaper00059253:sucrose_stearic-acid_upregulated
      WBPaper00059253:sucrose_upregulated
      WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061527:xbx-3-DH11.5_20397
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062534:fat-P-80_downregulated
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00065005:sams-3(RNAi)_upregulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00034739:N2lessDR1350
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_G
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00045960:L4-lethargus_downregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction: WBInteraction000159415
      WBInteraction000426153
  Map_info: Positive: Positive_clone: F31F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -19.9687
  Reference: WBPaper00029024
  Method: Gene