WormBase Tree Display for Gene: WBGene00017933
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| WBGene00017933 | SMap | S_parent | Sequence | F29G9 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | F29G9.7 | ||||||||
| Molecular_name | F29G9.7 | |||||||||
| Other_name | CELE_F29G9.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | F29G9.7 | |||||||||
| DB_info | Database | AceView | gene | 5G514 | ||||||
| WormQTL | gene | WBGene00017933 | ||||||||
| WormFlux | gene | WBGene00017933 | ||||||||
| NDB | locus_tag | CELE_F29G9.7 | ||||||||
| NCBI | gene | 185123 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 21 Sep 2017 13:57:53 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (30) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00031964 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00152591 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
| Paralog (58) | ||||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. | Paper_evidence | WBPaper00012854 | ||||||
| Curator_confirmed | WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
| Automated_description | Enriched in several structures, including ABalpppppp; ABpraaappp; NSM; excretory system; and germ line based on RNA-seq; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and lin-4 based on microarray and RNA-seq studies. Is affected by ten chemicals including hydrogen sulfide; stavudine; and Rifampin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F29G9.7:wp125 | ||||||||
| F29G9.7:wp261 | ||||||||||
| Corresponding_pseudogene | F29G9.7 | |||||||||
| Associated_feature | WBsf668979 | |||||||||
| WBsf668980 | ||||||||||
| WBsf668981 | ||||||||||
| WBsf1000159 | ||||||||||
| WBsf1019727 | ||||||||||
| WBsf233750 | ||||||||||
| Experimental_info | Expr_pattern | Expr1025463 | ||||||||
| Expr1149845 | ||||||||||
| Expr2003147 | ||||||||||
| Expr2021360 | ||||||||||
| Drives_construct | WBCnstr00026904 | |||||||||
| Construct_product | WBCnstr00026904 | |||||||||
| Microarray_results | SMD_F29G9.7 | |||||||||
| A_12_P104881 | ||||||||||
| GPL14144_F29G9.7_547-606_0.941_1_A | ||||||||||
| GPL19516_CGZ0018961 | ||||||||||
| GPL21109_F29G9.7 | ||||||||||
| GPL8304_CE_WBGene00017933_A | ||||||||||
| GPL8673_F29G9_7P00111 | ||||||||||
| GPL8673_F29G9_7P00684 | ||||||||||
| GPL8673_F29G9_7P00802 | ||||||||||
| cea2.d.22606 | ||||||||||
| Expression_cluster (104) | ||||||||||
| Interaction (11) | ||||||||||
| Map_info | Positive | Positive_clone | F29G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | -0.415895 | ||||||||
| Reference | WBPaper00012854 | |||||||||
| WBPaper00065394 | ||||||||||
| Method | Gene |
