WormBase Tree Display for Gene: WBGene00017916

WBGene00017916 SMap: S_parent: Sequence: F29A7
  Identity: Version: 1
    Name: Sequence_name: F29A7.6
      Molecular_name: F29A7.6
        F29A7.6.1
        CE09777
      Other_name: 2D42 Accession_evidence: EMBL AF304124
        CELE_F29A7.6 Accession_evidence: NDB BX284602
      Public_name: F29A7.6
    DB_info: Database: AceView gene 2D42
        WormQTL gene WBGene00017916
        WormFlux gene WBGene00017916
        NDB locus_tag CELE_F29A7.6
        Panther gene CAEEL|WormBase=WBGene00017916|UniProtKB=O16207
          family PTHR13582
        NCBI gene 173618
        RefSeq protein NM_061948.4
        SwissProt UniProtAcc O16207
        TREEFAM TREEFAM_ID TF323810
        UniProt_GCRP UniProtAcc O16207
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (24)
    RNASeq_FPKM (74)
    GO_annotation: 00027457
    Ortholog (25)
    Structured_description: Automated_description: Predicted to be involved in maturation of 5.8S rRNA. Expressed widely. Is an ortholog of human MPHOSPH6 (M-phase phosphoprotein 6). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F29A7.6
    Corresponding_transcript: F29A7.6.1
    Other_sequence: CJC02385_1
      CR00066
      CRC05161_1
      CR00128
    Associated_feature: WBsf649940
      WBsf987042
      WBsf987043
      WBsf987044
      WBsf1011768
      WBsf222795
  Experimental_info: RNAi_result: WBRNAi00071123 Inferred_automatically: RNAi_primary
      WBRNAi00025303 Inferred_automatically: RNAi_primary
      WBRNAi00062025 Inferred_automatically: RNAi_primary
      WBRNAi00045892 Inferred_automatically: RNAi_primary
      WBRNAi00008718 Inferred_automatically: RNAi_primary
      WBRNAi00071654 Inferred_automatically: RNAi_primary
      WBRNAi00113530 Inferred_automatically: RNAi_primary
      WBRNAi00033459 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7529
      Expr1012599
      Expr1037702
      Expr1149796
      Expr2003130
      Expr2021343
    Drives_construct: WBCnstr00012674
      WBCnstr00026919
    Construct_product: WBCnstr00026919
    Microarray_results (20)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00040560:hpl-2_embryo_downregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045050:drh-3 (ne4253)_downregulated
      WBPaper00045420:fertilization_upregulated_protein
      WBPaper00045521:Gender_Neutral
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_3
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:downregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00051039:germline_enriched
      WBPaper00051404:alg-1(gk214)_upregulated
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056826:SGP_biased
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061007:HB101_downregulated
      WBPaper00061340:Excretory_cell_parent
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061527:lsm-4-F49C12.11_819
      WBPaper00062146:MOG-7-degron_2h_regulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_4
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00036286:Pattern_B
      WBPaper00037147:heatshock_upregulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(122_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_ME
      [cgc6390]:intrinsic
    Interaction (27)
  Map_info: Positive: Positive_clone: F29A7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -11.7902
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene