WormBase Tree Display for Gene: WBGene00017786
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| WBGene00017786 | SMap | S_parent | Sequence | F25E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F25E5.5 | |||||||
| Molecular_name | F25E5.5 | ||||||||
| F25E5.5.1 | |||||||||
| CE07139 | |||||||||
| F25E5.5.2 | |||||||||
| Other_name | CELE_F25E5.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F25E5.5 | ||||||||
| DB_info | Database | AceView | gene | 5H929C | |||||
| 5H929 | |||||||||
| WormQTL | gene | WBGene00017786 | |||||||
| WormFlux | gene | WBGene00017786 | |||||||
| NDB | locus_tag | CELE_F25E5.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017786|UniProtKB=O76651 | |||||||
| family | PTHR31006 | ||||||||
| NCBI | gene | 3565479 | |||||||
| RefSeq | protein | NM_001383338.2 | |||||||
| TREEFAM | TREEFAM_ID | TF319797 | |||||||
| TrEMBL | UniProtAcc | O76651 | |||||||
| UniProt_GCRP | UniProtAcc | O76651 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (47) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in AVA; Z1.p; Z4.a; male distal tip cell; and somatic gonad precursor based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain and F-box protein she-1-like. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25E5.5 | |||||||
| Corresponding_transcript | F25E5.5.1 | ||||||||
| F25E5.5.2 | |||||||||
| Other_sequence | CJC07002_1 | ||||||||
| CBC01108_1 | |||||||||
| Associated_feature | WBsf1000463 | ||||||||
| WBsf1000464 | |||||||||
| WBsf231983 | |||||||||
| WBsf231984 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045508 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031377 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013874 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025084 | ||||||||
| Expr1149428 | |||||||||
| Expr2002962 | |||||||||
| Expr2021178 | |||||||||
| Drives_construct | WBCnstr00027017 | ||||||||
| Construct_product | WBCnstr00027017 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (129) | |||||||||
| Interaction (116) | |||||||||
| Map_info | Positive | Positive_clone | F25E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.750858 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
