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WormBase Tree Display for Gene: WBGene00017786

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Name Class

WBGene00017786SMapS_parentSequenceF25E5
IdentityVersion1
NameSequence_nameF25E5.5
Molecular_nameF25E5.5
F25E5.5.1
CE07139
F25E5.5.2
Other_nameCELE_F25E5.5Accession_evidenceNDBBX284605
Public_nameF25E5.5
DB_infoDatabaseAceViewgene5H929C
5H929
WormQTLgeneWBGene00017786
WormFluxgeneWBGene00017786
NDBlocus_tagCELE_F25E5.5
PanthergeneCAEEL|WormBase=WBGene00017786|UniProtKB=O76651
familyPTHR31006
NCBIgene3565479
RefSeqproteinNM_001383338.2
TREEFAMTREEFAM_IDTF319797
TrEMBLUniProtAccO76651
UniProt_GCRPUniProtAccO76651
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (28)
RNASeq_FPKM (74)
OrthologWBGene00029108Caenorhabditis briggsaeFrom_analysisHillier-set
WBGene00143126Caenorhabditis brenneriFrom_analysisOMA
WBGene00132557Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00061651Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00037679Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g11033Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12745Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12804Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12805Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g6229Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g8865Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g9368Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g1521Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP29.g16257Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16258Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16259Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16260Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16261Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16262Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11273Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g1379Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g1380Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g14170Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g22409Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g6577Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1296Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g1297Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g1298Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g6383Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10615Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g17524Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g18572Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2552Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2554Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2556Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2558Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13053Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g13054Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g13958Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_00253.g7954Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12533Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_03614.g30744Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18913Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009967Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g14711Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00211026Caenorhabditis japonicaFrom_analysisWormBase-Compara
nigoni.pc_2016.07.11_023.g28436Caenorhabditis nigoniFrom_analysisWormBase-Compara
Paralog (17)
Structured_descriptionConcise_descriptionThis gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.Paper_evidenceWBPaper00012854
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnriched in AVA; Z1.p; Z4.a; male distal tip cell; and somatic gonad precursor based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain and F-box protein she-1-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF25E5.5
Corresponding_transcriptF25E5.5.1
F25E5.5.2
Other_sequenceCJC07002_1
CBC01108_1
Associated_featureWBsf1000463
WBsf1000464
WBsf231983
WBsf231984
Experimental_infoRNAi_resultWBRNAi00045508Inferred_automaticallyRNAi_primary
WBRNAi00031377Inferred_automaticallyRNAi_primary
WBRNAi00013874Inferred_automaticallyRNAi_primary
Expr_patternExpr1025084
Expr1149428
Expr2002962
Expr2021178
Drives_constructWBCnstr00027017
Construct_productWBCnstr00027017
Microarray_results (17)
Expression_cluster (129)
Interaction (116)
Map_infoPositivePositive_cloneF25E5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV0.750858
ReferenceWBPaper00012854
MethodGene