WormBase Tree Display for Gene: WBGene00017735
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| WBGene00017735 | SMap | S_parent | Sequence | F23C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | did-2 | Person_evidence | WBPerson3188 | |||||
| Sequence_name | F23C8.6 | ||||||||
| Molecular_name | F23C8.6 | ||||||||
| F23C8.6.1 | |||||||||
| CE20715 | |||||||||
| Other_name | phi-24 | Person_evidence | WBPerson2582 | ||||||
| CELE_F23C8.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | did-2 | ||||||||
| DB_info | Database | AceView | gene | 1C988 | |||||
| WormQTL | gene | WBGene00017735 | |||||||
| WormFlux | gene | WBGene00017735 | |||||||
| NDB | locus_tag | CELE_F23C8.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017735|UniProtKB=Q9TXI3 | |||||||
| family | PTHR10476 | ||||||||
| NCBI | gene | 171801 | |||||||
| RefSeq | protein | NM_058573.6 | |||||||
| TREEFAM | TREEFAM_ID | TF300076 | |||||||
| TrEMBL | UniProtAcc | Q9TXI3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TXI3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Aug 2013 16:40:57 | WBPerson2970 | Name_change | CGC_name | did-2 | ||||
| 3 | 08 Aug 2013 16:41:57 | WBPerson2970 | Name_change | CGC_name | did-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | did | ||||||||
| Allele (14) | |||||||||
| Strain | WBStrain00003129 | ||||||||
| WBStrain00037412 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00096979 | ||||||||
| 00096980 | |||||||||
| 00096981 | |||||||||
| 00096982 | |||||||||
| 00096983 | |||||||||
| 00096984 | |||||||||
| 00096985 | |||||||||
| 00096986 | |||||||||
| 00096987 | |||||||||
| 00123037 | |||||||||
| Contained_in_operon | CEOP1044 | ||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00007216 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012903 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020866 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in endosome transport via multivesicular body sorting pathway; late endosome to vacuole transport; and protein transport. Located in endosome membrane. Expressed in several structures, including anal depressor muscle; hypodermis; intestine; nervous system; and vulva. Is an ortholog of human CHMP1B (charged multivesicular body protein 1B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F23C8.6 | |||||||
| Corresponding_transcript | F23C8.6.1 | ||||||||
| Other_sequence (73) | |||||||||
| Associated_feature | WBsf648968 | ||||||||
| WBsf982870 | |||||||||
| WBsf219028 | |||||||||
| WBsf219029 | |||||||||
| Experimental_info | RNAi_result (25) | ||||||||
| Expr_pattern | Expr3527 | ||||||||
| Expr3556 | |||||||||
| Expr5836 | |||||||||
| Expr15746 | |||||||||
| Expr15748 | |||||||||
| Expr1015837 | |||||||||
| Expr1037613 | |||||||||
| Expr1149326 | |||||||||
| Expr2010925 | |||||||||
| Expr2029164 | |||||||||
| Drives_construct | WBCnstr00003612 | ||||||||
| WBCnstr00011451 | |||||||||
| WBCnstr00027064 | |||||||||
| WBCnstr00042506 | |||||||||
| Construct_product | WBCnstr00011480 | ||||||||
| WBCnstr00021412 | |||||||||
| WBCnstr00021414 | |||||||||
| WBCnstr00021415 | |||||||||
| WBCnstr00027064 | |||||||||
| WBCnstr00042506 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | I | Position | -8.72793 | |||||
| Positive | Positive_clone | F23C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031185 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048833 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
