WormBase Tree Display for Gene: WBGene00017713
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| WBGene00017713 | SMap | S_parent | Sequence | F22E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F22E5.20 | |||||||
| Molecular_name | F22E5.20 | ||||||||
| F22E5.20.1 | |||||||||
| CE33623 | |||||||||
| Other_name | CELE_F22E5.20 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F22E5.20 | ||||||||
| DB_info | Database | AceView | gene | 2C962 | |||||
| WormQTL | gene | WBGene00017713 | |||||||
| WormFlux | gene | WBGene00017713 | |||||||
| NDB | locus_tag | CELE_F22E5.20 | |||||||
| NCBI | gene | 3565664 | |||||||
| RefSeq | protein | NM_001026939.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322477 | |||||||
| TrEMBL | UniProtAcc | Q7KQ96 | |||||||
| UniProt_GCRP | UniProtAcc | Q7KQ96 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g3746 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00019040 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00022560 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018021 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00019037 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00022557 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00021299 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | F22E5.20 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABalapapapa; ABalapppapa; ABalppappa; ABalpppapa; and ciliated neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including hydrogen sulfide; mianserin; and Psoralens based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F22E5.20 | |||||||
| Corresponding_transcript | F22E5.20.1 | ||||||||
| Associated_feature | WBsf649934 | ||||||||
| WBsf987005 | |||||||||
| WBsf222778 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045337 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1014440 | ||||||||
| Expr1037600 | |||||||||
| Expr1149261 | |||||||||
| Expr2002869 | |||||||||
| Expr2021086 | |||||||||
| Drives_construct | WBCnstr00027080 | ||||||||
| Construct_product | WBCnstr00027080 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (111) | |||||||||
| Map_info | Positive | Positive_clone | F22E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -12.1607 | |||||||
| Method | Gene |
