WormBase Tree Display for Gene: WBGene00017704
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WBGene00017704 | SMap | S_parent | Sequence | F22E5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | F22E5.2 | |||||||
Molecular_name | F22E5.2 | ||||||||
F22E5.2.1 | |||||||||
CE54044 | |||||||||
Other_name | CELE_F22E5.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F22E5.2 | ||||||||
DB_info | Database | AceView | gene | 2C955 | |||||
WormQTL | gene | WBGene00017704 | |||||||
WormFlux | gene | WBGene00017704 | |||||||
NDB | locus_tag | CELE_F22E5.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017704|UniProtKB=O16716 | |||||||
family | PTHR21453 | ||||||||
NCBI | gene | 43578478 | |||||||
RefSeq | protein | NM_001377730.2 | |||||||
TREEFAM | TREEFAM_ID | TF322011 | |||||||
TrEMBL | UniProtAcc | O16716 | |||||||
UniProt_GCRP | UniProtAcc | O16716 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 21 Oct 2019 15:06:38 | WBPerson4025 | Event | Split_into | WBGene00305111 | ||||
Split_into | WBGene00305111 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (15) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00146848 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
chrII_pilon.g3743 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (83) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including AVJ; cholinergic neurons; intestine; rect_D; and rectal epithelial cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including eat-2; pmk-1; and bar-1 based on tiling array; microarray; and RNA-seq studies. Is affected by eight chemicals including metformin; Sirolimus; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F22E5.2 | |||||||
Corresponding_CDS_history | F22E5.2:wp274 | ||||||||
Corresponding_transcript | F22E5.2.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00031282 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020148 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013767 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020658 | ||||||||
Expr1149260 | |||||||||
Expr2002871 | |||||||||
Expr2021088 | |||||||||
Drives_construct | WBCnstr00027088 | ||||||||
Construct_product | WBCnstr00027088 | ||||||||
Microarray_results | SMD_F22E5.2 | ||||||||
180918_at | |||||||||
Aff_F22E5.2 | |||||||||
GPL3518_CE09554 | |||||||||
GPL8673_F22E5_2P00132 | |||||||||
GPL9450_F22E5.2 | |||||||||
cea2.i.11543 | |||||||||
Expression_cluster (57) | |||||||||
Interaction (14) | |||||||||
Map_info | Positive | Positive_clone | F22E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -12.2008 | |||||||
Method | Gene |