WormBase Tree Display for Gene: WBGene00017677
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| WBGene00017677 | SMap | S_parent | Sequence | F21F8 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | asp-11 | Person_evidence | WBPerson261 | ||||||
| Sequence_name | F21F8.2 | |||||||||
| Molecular_name | F21F8.2 | |||||||||
| Other_name | CELE_F21F8.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | asp-11 | |||||||||
| DB_info | Database | AceView | gene | 5I755 | ||||||
| WormQTL | gene | WBGene00017677 | ||||||||
| WormFlux | gene | WBGene00017677 | ||||||||
| NDB | locus_tag | CELE_F21F8.2 | ||||||||
| NCBI | gene | 184787 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 23 Nov 2012 14:10:21 | WBPerson2970 | Name_change | CGC_name | asp-11 | |||||
| 3 | 18 Sep 2014 13:19:10 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | asp | |||||||||
| Allele (36) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00157783 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Inparanoid_8 | ||||||||||
| WBGene00217250 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| WBGene00093183 | Pristionchus pacificus | From_analysis | OMA | |||||||
| Structured_description | Automated_description | Is affected by several genes including daf-16; eat-2; and clk-1 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including methylmercuric chloride; Tunicamycin; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F21F8.2:wp106 | ||||||||
| F21F8.2:wp245 | ||||||||||
| Corresponding_pseudogene | F21F8.2 | |||||||||
| Other_sequence | CJC02814_1 | |||||||||
| Experimental_info | Expr_pattern | Expr1020953 | ||||||||
| Expr1149159 | ||||||||||
| Microarray_results (15) | ||||||||||
| Expression_cluster (59) | ||||||||||
| Interaction (27) | ||||||||||
| Map_info | Map | V | Position | 1.26395 | ||||||
| Positive | Positive_clone | F21F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00038491 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
