WormBase Tree Display for Gene: WBGene00017599
expand all nodes | collapse all nodes | view schema
| WBGene00017599 | SMap | S_parent | Sequence | F19F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F19F10.3 | |||||||
| Molecular_name | F19F10.3 | ||||||||
| F19F10.3.1 | |||||||||
| CE45275 | |||||||||
| Other_name | CELE_F19F10.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F19F10.3 | ||||||||
| DB_info | Database | AceView | gene | 5I31 | |||||
| WormQTL | gene | WBGene00017599 | |||||||
| WormFlux | gene | WBGene00017599 | |||||||
| NDB | locus_tag | CELE_F19F10.3 | |||||||
| NCBI | gene | 184685 | |||||||
| RefSeq | protein | NM_072544.3 | |||||||
| TREEFAM | TREEFAM_ID | TF320639 | |||||||
| TrEMBL | UniProtAcc | O01516 | |||||||
| UniProt_GCRP | UniProtAcc | O01516 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01025599 | ||||||||
| WBVar01499740 | |||||||||
| WBVar01496612 | |||||||||
| WBVar01500129 | |||||||||
| WBVar01499056 | |||||||||
| WBVar00462820 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01499316 | |||||||||
| WBVar01500066 | |||||||||
| WBVar01025598 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (14) | |||||||||
| Paralog | WBGene00011288 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00011289 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00012764 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including amphid sheath cell; enteric muscle; excretory cell; neurons; and rectal muscle based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by thirteen chemicals including D-glucose; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4440); NTF2-like domain superfamily; and Domain of unknown function DUF4440. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F19F10.3 | |||||||
| Corresponding_CDS_history | F19F10.3:wp217 | ||||||||
| Corresponding_transcript | F19F10.3.1 | ||||||||
| Other_sequence | ES743628.1 | ||||||||
| ES413576.1 | |||||||||
| EX914151.1 | |||||||||
| EX009566.1 | |||||||||
| EX012652.1 | |||||||||
| Hbac_isotig04630 | |||||||||
| EX011776.1 | |||||||||
| ES410221.1 | |||||||||
| Associated_feature | WBsf646945 | ||||||||
| WBsf646946 | |||||||||
| WBsf1000472 | |||||||||
| WBsf231993 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045025 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013563 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025112 | ||||||||
| Expr1148986 | |||||||||
| Expr2002753 | |||||||||
| Expr2020970 | |||||||||
| Drives_construct | WBCnstr00027172 | ||||||||
| Construct_product | WBCnstr00027172 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (142) | |||||||||
| Map_info | Positive | Positive_clone | F19F10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.795075 | |||||||
| Method | Gene |
