WormBase Tree Display for Gene: WBGene00011288
expand all nodes | collapse all nodes | view schema
| WBGene00011288 | SMap | S_parent | Sequence | R102 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R102.1 | |||||||
| Molecular_name | R102.1 | ||||||||
| R102.1.1 | |||||||||
| CE42598 | |||||||||
| Other_name | CELE_R102.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | R102.1 | ||||||||
| DB_info | Database | AceView | gene | 4L449 | |||||
| WormQTL | gene | WBGene00011288 | |||||||
| WormFlux | gene | WBGene00011288 | |||||||
| NDB | locus_tag | CELE_R102.1 | |||||||
| NCBI | gene | 187891 | |||||||
| RefSeq | protein | NM_069573.5 | |||||||
| TREEFAM | TREEFAM_ID | TF320639 | |||||||
| TrEMBL | UniProtAcc | Q21887 | |||||||
| UniProt_GCRP | UniProtAcc | Q21887 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00011289 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00017599 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00012764 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; muscle cell; neurons; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-12; and prg-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including multi-walled carbon nanotube; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4440); NTF2-like domain superfamily; and Domain of unknown function DUF4440. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R102.1 | |||||||
| Corresponding_CDS_history | R102.1:wp190 | ||||||||
| Corresponding_transcript | R102.1.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051654 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017673 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112693 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034796 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020505 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112687 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051655 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094891 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014695 | ||||||||
| Expr1155327 | |||||||||
| Expr2005532 | |||||||||
| Expr2023751 | |||||||||
| Drives_construct | WBCnstr00030774 | ||||||||
| Construct_product | WBCnstr00030774 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction | WBInteraction000223280 | ||||||||
| WBInteraction000307994 | |||||||||
| WBInteraction000324251 | |||||||||
| WBInteraction000367917 | |||||||||
| WBInteraction000443575 | |||||||||
| WBInteraction000521090 | |||||||||
| WBInteraction000548186 | |||||||||
| Map_info | Positive | Positive_clone | R102 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.66319 | |||||||
| Method | Gene |
