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WormBase Tree Display for Gene: WBGene00017504

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Name Class

WBGene00017504SMapS_parentSequenceF16B4
IdentityVersion1
NameSequence_nameF16B4.2
Molecular_nameF16B4.2a
F16B4.2a.1
CE17012
F16B4.2b
CE36928
F16B4.2b.1
Other_nameCELE_F16B4.2Accession_evidenceNDBBX284605
Public_nameF16B4.2
DB_infoDatabaseAceViewgene5C81
WormQTLgeneWBGene00017504
WormFluxgeneWBGene00017504
NDBlocus_tagCELE_F16B4.2
PanthergeneCAEEL|WormBase=WBGene00017504|UniProtKB=Q6EZG9
familyPTHR31006
NCBIgene178649
RefSeqproteinNM_001028638.5
NM_001028639.5
TREEFAMTREEFAM_IDTF321793
TrEMBLUniProtAccH2KZS8
Q6EZG9
UniProt_GCRPUniProtAccQ6EZG9
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (57)
RNASeq_FPKM (74)
Ortholog (35)
Paralog (17)
Structured_descriptionConcise_descriptionThis gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.Paper_evidenceWBPaper00012854
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnriched in muscle cell; neurons; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; Rifampin; and Sodium Chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain and F-box protein she-1-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF16B4.2a
F16B4.2b
Corresponding_CDS_historyF16B4.2:wp126
Corresponding_transcriptF16B4.2a.1
F16B4.2b.1
Other_sequenceCR01264
CRC09054_1
Associated_featureWBsf231429
Experimental_infoRNAi_resultWBRNAi00044788Inferred_automaticallyRNAi_primary
WBRNAi00031029Inferred_automaticallyRNAi_primary
WBRNAi00044789Inferred_automaticallyRNAi_primary
Expr_patternExpr1026997
Expr1148753
Expr2002648
Expr2020865
Drives_constructWBCnstr00027249
Construct_productWBCnstr00027249
Microarray_results (27)
Expression_clusterWBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044030:nhr-8(hd117)_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045401:N.parisii_64h_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00046496:Rifampicin_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050053:muscle_enriched_Day4
WBPaper00050344:ASER-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:mes-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053771:up_at_3h-NaCl
WBPaper00053771:up_at_24h-NaCl
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00054192:cold-shock_upregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055103:thoc-5(wy822)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056167:Cry5B_downregulated
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056826:SGP_biased
WBPaper00056855:his-72(uge40)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057068:Cadmium_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060526:plp-1(ok2155)_downregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061340:AVL
WBPaper00061527:C10C5.2-Y58A7A.3
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061651:ASER_enriched
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:etr-1(lq61)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064158:xpo-1(RNAi)_upregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064871:PA14_upregulated_AWA
WBPaper00065029:cadmium_upregulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065149:lin-52(n771)_downregulated
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065749:Heat-Shock-With-Recovery_upregulated_N2
WBPaper00065841:35_4
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066204:CdCl2_upregulated_mRNA
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00029437:dcr-1_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00034757:up_by_oxidative_stress
WBPaper00035227:heat_shock_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_F
WBPaper00038172:tax-6null_up_regulated
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00041207:CE_dauer_up
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00044013:nasp-1_downregulated
WBPaper00044091:Bpseudomallei_induced_8h
WBPaper00044091:Bpseudomallei_induced_12h
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00050515:nipi-3(fr4)_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00055899:nitroguanidine_regulated
Interaction (26)
Map_infoPositivePositive_cloneF16B4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-18.3808
ReferenceWBPaper00012854
MethodGene