WormBase Tree Display for Gene: WBGene00017494
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| WBGene00017494 | SMap | S_parent | Sequence | F15E11 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | irld-31 | Person_evidence | WBPerson260 | ||||||
| Sequence_name | F15E11.5 | |||||||||
| Molecular_name | F15E11.5 | |||||||||
| Other_name | CELE_F15E11.5 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | irld-31 | |||||||||
| DB_info | Database | AceView | gene | 5C818 | ||||||
| WormQTL | gene | WBGene00017494 | ||||||||
| WormFlux | gene | WBGene00017494 | ||||||||
| NDB | locus_tag | CELE_F15E11.5 | ||||||||
| NCBI | gene | 184540 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-31 | |||||
| 3 | 09 Sep 2015 15:24:56 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | irld | |||||||||
| Allele (61) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00157036 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00152193 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00152325 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00143719 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00129716 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Paralog (54) | ||||||||||
| Structured_description | Automated_description | Is affected by several genes including drh-3; qui-1; and adr-1 based on RNA-seq studies. Is affected by dibromoacetic acid and Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F15E11.5:wp250 | ||||||||
| Corresponding_pseudogene | F15E11.5 | |||||||||
| Experimental_info | Expr_pattern | Expr1016005 | ||||||||
| Expr1148705 | ||||||||||
| Microarray_results | SMD_F15E11.5 | |||||||||
| 185339_at | ||||||||||
| A_12_P108414 | ||||||||||
| GPL14144_F15E11.5_558-617_0.939_1_A | ||||||||||
| GPL19516_CGZ0016510 | ||||||||||
| GPL21109_F15E11.5 | ||||||||||
| GPL8304_CE_WBGene00017494_A | ||||||||||
| GPL8673_F15E11_5P00266 | ||||||||||
| GPL9450_F15E11.5 | ||||||||||
| cea2.i.36713 | ||||||||||
| Expression_cluster (17) | ||||||||||
| Interaction (20) | ||||||||||
| Map_info | Map | V | Position | -14.8628 | ||||||
| Positive | Positive_clone | F15E11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
