WormBase Tree Display for Gene: WBGene00017323
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| WBGene00017323 | SMap | S_parent | Sequence | F09G8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mps-4 | Person_evidence | WBPerson3192 | |||||
| Sequence_name | F09G8.9 | ||||||||
| Molecular_name | F09G8.9 | ||||||||
| F09G8.9.1 | |||||||||
| CE00144 | |||||||||
| Other_name | CELE_F09G8.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | mps-4 | ||||||||
| DB_info | Database | AceView | gene | 3J360 | |||||
| WormQTL | gene | WBGene00017323 | |||||||
| WormFlux | gene | WBGene00017323 | |||||||
| NDB | locus_tag | CELE_F09G8.9 | |||||||
| NCBI | gene | 184271 | |||||||
| RefSeq | protein | NM_066417.6 | |||||||
| SwissProt | UniProtAcc | P34394 | |||||||
| UniProt_GCRP | UniProtAcc | P34394 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Jul 2005 16:23:31 | WBPerson2970 | Name_change | CGC_name | mps-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mps | ||||||||
| Allele (11) | |||||||||
| Strain | WBStrain00037419 | ||||||||
| WBStrain00007578 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00042116 | ||||||||
| 00042117 | |||||||||
| Contained_in_operon | CEOP5609 | ||||||||
| Ortholog | WBGene00036530 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Sp34_30234600 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g8353 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | mps-4 encodes a single-pass transmembrane protein that is related to the vertebrate KCNE proteins, also known as MinK-related peptides (MiRPs) that associate with, and regulate, pore-forming ion channels; mps-1 is required for the normal function of several neurons and thus for normal body touch sensation, chemotaxis to select molecules, osmotic avoidance, and nose-touch; when coexpressed in tissue culture cells with C. elegans KVS-1, MPS-4 is able to alter the activity of this potassium-selective channel, suggesting that MPS-4 functions in vivo to regulate KVS-1 activity in neurons in which the two proteins are coexpressed; MPS-4 reporter fusions are expressed in neurons tentatively identified as AIA and AUA, as well as in the PVC neuron and the enteric muscle. | Paper_evidence | WBPaper00025063 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 11 May 2007 00:00:00 | ||||||||
| Automated_description | Enables potassium channel regulator activity. Involved in regulation of potassium ion transport. Expressed in enteric muscle; ganglia; and pharyngeal segment. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F09G8.9 | |||||||
| Corresponding_transcript | F09G8.9.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00044194 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005742 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030737 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044193 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013021 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005738 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3268 | ||||||||
| Expr4658 | |||||||||
| Expr1015290 | |||||||||
| Expr1148150 | |||||||||
| Expr2013674 | |||||||||
| Expr2031908 | |||||||||
| Drives_construct | WBCnstr00011271 | ||||||||
| WBCnstr00027388 | |||||||||
| Construct_product | WBCnstr00011271 | ||||||||
| WBCnstr00027388 | |||||||||
| Antibody | WBAntibody00001253 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (42) | |||||||||
| Interaction | WBInteraction000052727 | ||||||||
| WBInteraction000198284 | |||||||||
| WBInteraction000430254 | |||||||||
| WBInteraction000461467 | |||||||||
| WBInteraction000540969 | |||||||||
| WBInteraction000556351 | |||||||||
| Map_info | Map | III | Position | -0.349626 | Error | 0.000698 | |||
| Positive | Positive_clone | F09G8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025063 | ||||||||
| WBPaper00028450 | |||||||||
| WBPaper00029366 | |||||||||
| WBPaper00042150 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
