WormBase Tree Display for Gene: WBGene00017247
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WBGene00017247 | SMap | S_parent | Sequence | F08D12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | F08D12.3 | |||||
Molecular_name | F08D12.3 | ||||||
F08D12.3.1 | |||||||
CE09236 | |||||||
Other_name | CELE_F08D12.3 | Accession_evidence | NDB | BX284602 | |||
Public_name | F08D12.3 | ||||||
DB_info | Database | AceView | gene | 2D69C | |||
2D69 | |||||||
WormQTL | gene | WBGene00017247 | |||||
WormFlux | gene | WBGene00017247 | |||||
NDB | locus_tag | CELE_F08D12.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017247|UniProtKB=P91237 | |||||
family | PTHR34150 | ||||||
NCBI | gene | 3565148 | |||||
RefSeq | protein | NM_061962.6 | |||||
TrEMBL | UniProtAcc | P91237 | |||||
UniProt_GCRP | UniProtAcc | P91237 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Split_into | WBGene00043239 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (34) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00092167 | Pristionchus pacificus | From_analysis | Inparanoid_8 | |||
WBGene00105988 | Pristionchus pacificus | From_analysis | OMA | ||||
Inparanoid_8 | |||||||
FL83_17189 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||
FL83_21154 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||
GCK72_006780 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
GCK72_006784 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
chrII_pilon.g3784 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00079338 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00009604 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00013090 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00017246 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
WormBase-Compara | |||||||
WBGene00022445 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00022440 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00022439 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enriched in ABalaaaala; ABalaapaaa; pharyngeal gland cell; and pharyngeal neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twelve chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: CC domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F08D12.3 | |||||
Corresponding_CDS_history | F08D12.3b:wp244 | ||||||
Corresponding_transcript | F08D12.3.1 | ||||||
Associated_feature | WBsf644023 | ||||||
WBsf987054 | |||||||
WBsf987055 | |||||||
WBsf987056 | |||||||
WBsf987057 | |||||||
WBsf987058 | |||||||
WBsf987059 | |||||||
WBsf1011770 | |||||||
WBsf1011771 | |||||||
WBsf220952 | |||||||
Experimental_info | RNAi_result | WBRNAi00043991 | Inferred_automatically | RNAi_primary | |||
WBRNAi00012881 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1028836 | ||||||
Expr1147963 | |||||||
Expr2002287 | |||||||
Expr2020506 | |||||||
Drives_construct | WBCnstr00027457 | ||||||
Construct_product | WBCnstr00027457 | ||||||
Microarray_results (23) | |||||||
Expression_cluster (170) | |||||||
Interaction (36) | |||||||
Map_info | Positive | Positive_clone | F08D12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | II | -11.1465 | |||||
Method | Gene |