WormBase Tree Display for Gene: WBGene00013090
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| WBGene00013090 | SMap | S_parent | Sequence | Y51B9A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y51B9A.8 | |||||||
| Molecular_name | Y51B9A.8 | ||||||||
| Y51B9A.8.1 | |||||||||
| CE53893 | |||||||||
| Other_name | CELE_Y51B9A.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y51B9A.8 | ||||||||
| DB_info | Database | AceView | gene | 2J689 | |||||
| WormQTL | gene | WBGene00013090 | |||||||
| WormFlux | gene | WBGene00013090 | |||||||
| NDB | locus_tag | CELE_Y51B9A.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013090|UniProtKB=Q9XXC6 | |||||||
| family | PTHR46219 | ||||||||
| NCBI | gene | 190141 | |||||||
| RefSeq | protein | NM_001377836.2 | |||||||
| TREEFAM | TREEFAM_ID | TF343615 | |||||||
| TrEMBL | UniProtAcc | Q9XXC6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XXC6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g5475 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00009604 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00022445 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00017246 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00022440 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00022439 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00017247 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Is affected by several genes including daf-16; daf-2; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by ten chemicals including nanoparticle; Cisplatin; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like; CC domain; and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y51B9A.8 | |||||||
| Corresponding_CDS_history | Y51B9A.8:wp274 | ||||||||
| Corresponding_transcript | Y51B9A.8.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057151 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1014308 | ||||||||
| Expr1160595 | |||||||||
| Drives_construct | WBCnstr00029760 | ||||||||
| Construct_product | WBCnstr00029760 | ||||||||
| Microarray_results | SMD_Y51B9A.8 | ||||||||
| 183216_at | |||||||||
| Aff_Y51B9A.8 | |||||||||
| GPL19516_CGZ0047761 | |||||||||
| GPL21109_Y51B9A.8 | |||||||||
| GPL3518_CE19218 | |||||||||
| GPL8304_CE_WBGene00013090_A | |||||||||
| GPL8673_Y51B9A_8P00188 | |||||||||
| GPL8673_Y51B9A_8P00270 | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction | WBInteraction000314568 | ||||||||
| WBInteraction000331096 | |||||||||
| WBInteraction000348318 | |||||||||
| WBInteraction000387328 | |||||||||
| WBInteraction000391088 | |||||||||
| WBInteraction000549533 | |||||||||
| WBInteraction000549534 | |||||||||
| Map_info | Positive | Positive_clone | Y51B9A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 1.34725 | |||||||
| Reference | WBPaper00064543 | ||||||||
| Method | Gene |
