WormBase Tree Display for Gene: WBGene00017247
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WBGene00017247 | SMap | S_parent | Sequence | F08D12 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (34) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (8) | ||||||
Paralog | WBGene00009604 | Caenorhabditis elegans | From_analysis | TreeFam | ||
WBGene00013090 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00017246 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
WormBase-Compara | ||||||
WBGene00022445 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | ||||||
WBGene00022440 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | ||||||
WBGene00022439 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in ABalaaaala; ABalaapaaa; pharyngeal gland cell; and pharyngeal neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twelve chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: CC domain. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F08D12.3 | ||||
Corresponding_CDS_history | F08D12.3b:wp244 | |||||
Corresponding_transcript | F08D12.3.1 | |||||
Associated_feature | WBsf644023 | |||||
WBsf987054 | ||||||
WBsf987055 | ||||||
WBsf987056 | ||||||
WBsf987057 | ||||||
WBsf987058 | ||||||
WBsf987059 | ||||||
WBsf1011770 | ||||||
WBsf1011771 | ||||||
WBsf220952 | ||||||
Experimental_info | RNAi_result | WBRNAi00043991 | Inferred_automatically | RNAi_primary | ||
WBRNAi00012881 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1028836 | |||||
Expr1147963 | ||||||
Expr2002287 | ||||||
Expr2020506 | ||||||
Drives_construct | WBCnstr00027457 | |||||
Construct_product | WBCnstr00027457 | |||||
Microarray_results (23) | ||||||
Expression_cluster (170) | ||||||
Interaction (36) | ||||||
Map_info | Positive | Positive_clone | F08D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | II | -11.1465 | ||||
Method | Gene |