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WormBase Tree Display for Gene: WBGene00017247

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Name Class

WBGene00017247SMapS_parentSequenceF08D12
IdentityVersion2
NameSequence_nameF08D12.3
Molecular_nameF08D12.3
F08D12.3.1
CE09236
Other_nameCELE_F08D12.3Accession_evidenceNDBBX284602
Public_nameF08D12.3
DB_infoDatabaseAceViewgene2D69C
2D69
WormQTLgeneWBGene00017247
WormFluxgeneWBGene00017247
NDBlocus_tagCELE_F08D12.3
PanthergeneCAEEL|WormBase=WBGene00017247|UniProtKB=P91237
familyPTHR34150
NCBIgene3565148
RefSeqproteinNM_061962.6
TrEMBLUniProtAccP91237
UniProt_GCRPUniProtAccP91237
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
230 Jun 2014 13:23:05WBPerson1983EventSplit_intoWBGene00043239
Split_intoWBGene00043239
StatusLive
Gene_infoBiotypeSO:0001217
Allele (34)
RNASeq_FPKM (74)
OrthologWBGene00092167Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00105988Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
FL83_17189Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_21154Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006780Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_006784Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g3784Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00079338Caenorhabditis remaneiFrom_analysisWormBase-Compara
ParalogWBGene00009604Caenorhabditis elegansFrom_analysisTreeFam
WBGene00013090Caenorhabditis elegansFrom_analysisTreeFam
WBGene00017246Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00022445Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00022440Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00022439Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in ABalaaaala; ABalaapaaa; pharyngeal gland cell; and pharyngeal neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twelve chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: CC domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF08D12.3
Corresponding_CDS_historyF08D12.3b:wp244
Corresponding_transcriptF08D12.3.1
Associated_featureWBsf644023
WBsf987054
WBsf987055
WBsf987056
WBsf987057
WBsf987058
WBsf987059
WBsf1011770
WBsf1011771
WBsf220952
Experimental_infoRNAi_resultWBRNAi00043991Inferred_automaticallyRNAi_primary
WBRNAi00012881Inferred_automaticallyRNAi_primary
Expr_patternExpr1028836
Expr1147963
Expr2002287
Expr2020506
Drives_constructWBCnstr00027457
Construct_productWBCnstr00027457
Microarray_results (23)
Expression_cluster (170)
InteractionWBInteraction000175453
WBInteraction000187873
WBInteraction000189579
WBInteraction000192436
WBInteraction000192885
WBInteraction000197489
WBInteraction000214442
WBInteraction000216976
WBInteraction000218693
WBInteraction000222397
WBInteraction000224328
WBInteraction000229742
WBInteraction000241603
WBInteraction000248399
WBInteraction000259665
WBInteraction000263383
WBInteraction000280055
WBInteraction000293135
WBInteraction000298534
WBInteraction000298545
WBInteraction000302579
WBInteraction000318055
WBInteraction000331671
WBInteraction000340140
WBInteraction000350099
WBInteraction000353808
WBInteraction000354196
WBInteraction000368438
WBInteraction000369898
WBInteraction000410725
WBInteraction000411192
WBInteraction000433460
WBInteraction000437838
WBInteraction000439596
WBInteraction000459706
WBInteraction000514883
Map_infoPositivePositive_cloneF08D12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-11.1465
MethodGene