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WormBase Tree Display for Gene: WBGene00017246

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Name Class

WBGene00017246SMapS_parentSequenceF08D12
IdentityVersion1
NameSequence_nameF08D12.2
Molecular_nameF08D12.2
F08D12.2.1
CE41558
Other_nameCELE_F08D12.2Accession_evidenceNDBBX284602
Public_nameF08D12.2
DB_infoDatabaseAceViewgene2D71
WormQTLgeneWBGene00017246
WormFluxgeneWBGene00017246
NDBlocus_tagCELE_F08D12.2
PanthergeneCAEEL|WormBase=WBGene00017246|UniProtKB=P91238
familyPTHR34150
NCBIgene184176
RefSeqproteinNM_061963.8
TREEFAMTREEFAM_IDTF343615
TrEMBLUniProtAccP91238
UniProt_GCRPUniProtAccP91238
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (26)
RNASeq_FPKM (74)
OrthologWBGene00092167Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00105988Pristionchus pacificusFrom_analysisInparanoid_8
FL83_17189Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_21154Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006780Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_006784Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g3785Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00079338Caenorhabditis remaneiFrom_analysisWormBase-Compara
ParalogWBGene00009604Caenorhabditis elegansFrom_analysisTreeFam
WBGene00013090Caenorhabditis elegansFrom_analysisTreeFam
WBGene00022445Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00017247Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00022439Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00022440Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in pharyngeal gland cell; rectal epithelial cell; and rectum based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; rotenone; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: CC domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF08D12.2
Corresponding_CDS_historyF08D12.2:wp125
F08D12.2:wp182
Corresponding_transcriptF08D12.2.1
Associated_featureWBsf644024
WBsf220953
WBsf220954
Experimental_infoRNAi_resultWBRNAi00012880Inferred_automaticallyRNAi_primary
WBRNAi00030645Inferred_automaticallyRNAi_primary
WBRNAi00043990Inferred_automaticallyRNAi_primary
Expr_patternExpr1021383
Expr1147962
Expr2002286
Expr2020505
Drives_constructWBCnstr00027458
Construct_productWBCnstr00027458
Microarray_results (11)
Expression_clusterWBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033070:Rhine_downregulated
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050096:P.aeruginosa_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00051558:aging_regulated
WBPaper00052856:Cadmium_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053909:N2_vs_CB4856_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00055648:nerve-ring_expressed
WBPaper00055827:daf-2(e1370)_downregulated
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:hpx-2(dg047)_downregulated_E.Coli
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057347:nhr-14(tm1473)_upreglated
WBPaper00059175:hlh-17p-XBP-1_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059605:simr-1(cmp36)_upregulated
WBPaper00059739:hira-1(gk835598)_downregulated_adult
WBPaper00059739:hira-1(gk835598)_downregulated_L4
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)
WBPaper00060224:atf-6(ok551)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060921:tbh-1(ok1196)_downregulated
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061340:g1A
WBPaper00061340:g1P
WBPaper00061340:g2
WBPaper00061340:Rectal_cell
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:M04G7.1-R06F6.7
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00061753:csr-1(tor159)_upregulated_20C
WBPaper00061902:camt-1(ok515)_regulated_AFD
WBPaper00062056:dpl-1(n2994)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064532:pals-22(jy3)_downregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064841:tent-5(tm3504)_upregulated_transcript
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065225:nhr-42(tm1375)_downregulated_S.aureus-infected
WBPaper00065258:anchor-cell_enriched
WBPaper00065623:99
WBPaper00065734:unc-25(e156)_downregulated
WBPaper00065749:Heat-Shock-With-Recovery_downregulated_N2
WBPaper00065841:78_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066004:fust-1(csb21)_upregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066118:cyclobutrifluram_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066163:crtc-1(wbm18)_upregulated_set-2(ok952)
WBPaper00066163:set-2(ok952)_downregulated_N2
cgc4489_group_16
WBPaper00006465:IV_ethanol_late_repression
WBPaper00034739:N2lessDR1350
WBPaper00034739:RIL17moreRIL14
WBPaper00038172:crh-1null_up_regulated
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00042234:xpa-1_upregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045673:colistin_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_rapamycin_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
Interaction (14)
Map_infoPositivePositive_cloneF08D12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-11.1172
MethodGene