WormBase Tree Display for Gene: WBGene00017134

WBGene00017134 SMap: S_parent: Sequence: EEED8
  Identity: Version: 1
    Name: Sequence_name: EEED8.3
      Molecular_name: EEED8.3
        EEED8.3.1
        CE01887
      Other_name: CELE_EEED8.3 Accession_evidence: NDB BX284602
      Public_name: EEED8.3
    DB_info: Database: AceView gene 2F705
        WormQTL gene WBGene00017134
        WormFlux gene WBGene00017134
        NDB locus_tag CELE_EEED8.3
        NCBI gene 184042
        RefSeq protein NM_062624.7
        SwissProt UniProtAcc Q09294
        TREEFAM TREEFAM_ID TF322224
        UniProt_GCRP UniProtAcc Q09294
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (22)
    RNASeq_FPKM (74)
    Ortholog: WBGene00025452 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00158971 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00146717 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00080221 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125291 Caenorhabditis japonica From_analysis: Inparanoid_8
      CSP26.g9054 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8399 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP32.g8773 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP40.g7156 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-EEED8.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g11409 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00082.g3675 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06049 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006021 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20103110 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_20103200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_20104010 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4491 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00017141 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Concise_description: EEED8.3 encodes a protein with similarity to fatty acid-binding proteins; loss of EEED8.3 activity via RNAi results in 20-30% embryonic lethality. Paper_evidence: WBPaper00005599
          Curator_confirmed: WBPerson1843
          Date_last_updated: 02 Aug 2007 00:00:00
      Automated_description: Enriched in germ line; germline precursor cell; head mesodermal cell; and pharyngeal muscle cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by nineteen chemicals including Heme; methylmercury hydroxide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Calycin. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: EEED8.3
    Corresponding_transcript: EEED8.3.1
    Other_sequence: FD515688.1
      CSC00979_1
    Associated_feature: WBsf644191
      WBsf657591
      WBsf657592
      WBsf221275
  Experimental_info: RNAi_result: WBRNAi00012703 Inferred_automatically: RNAi_primary
      WBRNAi00102651 Inferred_automatically: RNAi_primary
      WBRNAi00030510 Inferred_automatically: RNAi_primary
      WBRNAi00084052 Inferred_automatically: RNAi_primary
      WBRNAi00043699 Inferred_automatically: RNAi_primary
      WBRNAi00007544 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017249
      Expr1037361
      Expr1147683
      Expr2002170
      Expr2020391
    Drives_construct: WBCnstr00027544
    Construct_product: WBCnstr00027544
    Microarray_results (17)
    Expression_cluster (228)
    Interaction (181)
  Map_info: Positive: Positive_clone: EEED8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -1.66777
  Reference: WBPaper00042257
  Method: Gene