WormBase Tree Display for Gene: WBGene00017132
expand all nodes | collapse all nodes | view schema
WBGene00017132 | SMap | S_parent | Sequence | F07F6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 7 | |||||
Name | CGC_name | tofu-6 | |||||
Sequence_name | EEED8.1 | ||||||
Molecular_name | EEED8.1 | ||||||
EEED8.1.1 | |||||||
CE26746 | |||||||
Other_name | mel-2 | Person_evidence | WBPerson314 | ||||
mel-47 | Person_evidence | WBPerson629 | |||||
WBPerson314 | |||||||
CELE_EEED8.1 | Accession_evidence | NDB | BX284602 | ||||
Public_name | tofu-6 | ||||||
DB_info | Database | AceView | gene | 2F713 | |||
WormQTL | gene | WBGene00017132 | |||||
NDB | locus_tag | CELE_EEED8.1 | |||||
NCBI | gene | 24104386 | |||||
RefSeq | protein | NM_001306578.5 | |||||
SwissProt | UniProtAcc | Q09293 | |||||
UniProt_GCRP | UniProtAcc | Q09293 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tofu | ||||||
Reference_allele | WBVar00275444 | ||||||
WBVar00088001 | |||||||
Allele (31) | |||||||
Legacy_information | [C.elegansII] it20 : strict maternal effect embryonic lethal. OA1: it22. [Kemphues et al. 1988] | ||||||
Strain | WBStrain00023566 | ||||||
WBStrain00031149 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (33) | |||||||
Ortholog (23) | |||||||
Structured_description | Automated_description | Predicted to enable RNA binding activity. Involved in several processes, including embryonic cleavage; mitotic sister chromatid separation; and nucleic acid metabolic process. Located in nucleus and perinuclear region of cytoplasm. Expressed in germ line. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | EEED8.1 | |||||
Corresponding_transcript | EEED8.1.1 | ||||||
Other_sequence | CRC09352_1 | ||||||
CJC06104_1 | |||||||
CR00454 | |||||||
CBC05784_1 | |||||||
Associated_feature | WBsf644193 | ||||||
WBsf644194 | |||||||
WBsf221278 | |||||||
Experimental_info | RNAi_result | WBRNAi00113939 | Inferred_automatically | RNAi_primary | |||
WBRNAi00043689 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022694 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00103067 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033559 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00008592 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113938 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr8287 | ||||||
Expr14432 | |||||||
Expr16061 | |||||||
Expr1026068 | |||||||
Expr1037359 | |||||||
Expr1147673 | |||||||
Expr2017448 | |||||||
Expr2035587 | |||||||
Drives_construct | WBCnstr00016926 | ||||||
WBCnstr00037834 | |||||||
WBCnstr00040803 | |||||||
WBCnstr00042743 | |||||||
Construct_product | WBCnstr00016926 | ||||||
WBCnstr00037834 | |||||||
WBCnstr00040803 | |||||||
WBCnstr00042743 | |||||||
Regulate_expr_cluster | WBPaper00056900:TOFU-6_interacting | ||||||
Microarray_results (20) | |||||||
Expression_cluster (173) | |||||||
Interaction (472) | |||||||
Map_info | Map | II | Position | -1.63708 | Error | 0.021258 | |
Positive | Positive_clone | EEED8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5279 | |||||
4538 | |||||||
Pos_neg_data | 4469 | ||||||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |