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WormBase Tree Display for Gene: WBGene00017066

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Name Class

WBGene00017066SMapS_parentSequenceD2092
IdentityVersion2
NameCGC_namemaco-1Paper_evidenceWBPaper00038258
Person_evidenceWBPerson724
Sequence_nameD2092.5
Molecular_nameD2092.5
D2092.5.1
CE45670
Other_nameCELE_D2092.5Accession_evidenceNDBBX284601
Public_namemaco-1
DB_infoDatabaseAceViewgene1H170
WormQTLgeneWBGene00017066
WormFluxgeneWBGene00017066
NDBlocus_tagCELE_D2092.5
PanthergeneCAEEL|WormBase=WBGene00017066|UniProtKB=P91193
familyPTHR13289
NCBIgene183963
RefSeqproteinNM_059501.7
SwissProtUniProtAccP91193
TREEFAMTREEFAM_IDTF324023
UniProt_GCRPUniProtAccP91193
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
206 Apr 2011 14:40:30WBPerson2970Name_changeCGC_namemaco-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmaco
Allele (80)
StrainWBStrain00033005
WBStrain00022012
WBStrain00022013
RNASeq_FPKM (74)
GO_annotation (21)
OrthologWBGene00056130Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00033596Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00141429Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131314Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00192182Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00223325Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9621Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15200Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7125Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11142Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9613Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g15400Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g17629Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13832Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g29096Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6074Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00083.g3806Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-maco-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14669Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00687.g14417Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_17448Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001802Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05957Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20743Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10332900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1201Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237623Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00100293Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00260316Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00292756Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0050389Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
ZFIN:ZDB-GENE-040426-1097Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-040426-1188Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-041001-145Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:25572Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1913396Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1561685Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionConcise_descriptionmaco-1 encodes a novel protein with five transmembrane domains in the N-terminus and four coiled coil domains in the C-terminus; maco-1 is functionally conserved across species and is orthologous to human macoilin (OMIM:601301); macoilin is involved in assembly or traffic of ion channels or ion channel regulators; MACO-1 is not required for development but for appropriate regulation of neuronal activity; both transmembrane domains and coiled coil domains are required for appropriate function of MACO-1; proper function of MACO-1 is necessary for normal thermotaxis in many neurons; mutations in C. elegans macoilin disrupt aggregation and are associated with multiple behavioral defects; MACO-1 is localized to the rough ER of neurons; MACO-1 is also restricted to neuronal cell bodies at embryonic developmental stages.Paper_evidenceWBPaper00038258
WBPaper00038428
Curator_confirmedWBPerson12884
Date_last_updated15 Jul 2011 00:00:00
Automated_descriptionPredicted to enable microtubule binding activity. Involved in chemotaxis; neuronal signal transduction; and thermotaxis. Located in neuronal cell body; nuclear envelope; and rough endoplasmic reticulum. Expressed in epithelial cell; muscle cell; and nervous system. Is an ortholog of human MACO1 (macoilin 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSD2092.5
Corresponding_CDS_historyD2092.5:wp154
D2092.5:wp221
Corresponding_transcriptD2092.5.1
Other_sequenceCRC06233_1
Oden_isotig19062
CR10623
CJC09089_1
Associated_feature (11)
Experimental_infoRNAi_resultWBRNAi00043519Inferred_automaticallyRNAi_primary
WBRNAi00043518Inferred_automaticallyRNAi_primary
WBRNAi00007973Inferred_automaticallyRNAi_primary
WBRNAi00003295Inferred_automaticallyRNAi_primary
WBRNAi00116562Inferred_automaticallyRNAi_primary
Expr_pattern (12)
Drives_constructWBCnstr00013794
WBCnstr00013887
WBCnstr00013888
WBCnstr00018769
WBCnstr00027595
Construct_productWBCnstr00013794
WBCnstr00013888
WBCnstr00021857
WBCnstr00027595
AntibodyWBAntibody00002220
Microarray_results (20)
Expression_cluster (112)
InteractionWBInteraction000253192
WBInteraction000303978
WBInteraction000323592
WBInteraction000443269
WBProcessWBbiopr:00000025
Map_infoMapIPosition1.23755Error0.004358
PositivePositive_cloneD2092Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (11)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene