WormBase Tree Display for Gene: WBGene00017054
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WBGene00017054 | SMap | S_parent | Sequence | D2024 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | gstk-2 | Person_evidence | WBPerson1763 | |||||
Sequence_name | D2024.7 | ||||||||
Molecular_name | D2024.7 | ||||||||
D2024.7.1 | |||||||||
CE04296 | |||||||||
Other_name | CELE_D2024.7 | Accession_evidence | NDB | BX284604 | |||||
Public_name | gstk-2 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 27 Feb 2008 14:43:32 | WBPerson2970 | Name_change | CGC_name | gstk-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gstk | ||||||||
Allele (31) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00014251 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00020314 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Concise_description | gstk-2 encodes one of two C. elegans kappa class glutathione transferases; while gstk-2(RNAi) animals exhibit no obvious developmental or morphological abnormalities, animals doubly mutant for gstk-2 and gstk-1 exhibit decreased respiration and a lower concentration of the monounsaturated fatty acid cis-vaccenic acid; GSTK-2 is expressed primarily in the pharynx, muscles, and epidermis and localizes to mitochondria. | Paper_evidence | WBPaper00035091 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 14 Aug 2009 00:00:00 | ||||||||
Automated_description | Predicted to enable glutathione peroxidase activity and glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Located in mitochondrion. Expressed in body wall musculature; intestine; and pharynx. Is an ortholog of human GSTK1 (glutathione S-transferase kappa 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | D2024.7 | |||||||
Corresponding_transcript | D2024.7.1 | ||||||||
Other_sequence | CBC12524_1 | ||||||||
Associated_feature | WBsf996915 | ||||||||
WBsf996916 | |||||||||
WBsf230235 | |||||||||
WBsf230236 | |||||||||
WBsf230237 | |||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr8776 | ||||||||
Expr1021154 | |||||||||
Expr1037327 | |||||||||
Expr1147459 | |||||||||
Expr2012335 | |||||||||
Expr2030572 | |||||||||
Drives_construct (2) | |||||||||
Construct_product | WBCnstr00013514 | ||||||||
WBCnstr00027605 | |||||||||
Microarray_results | SMD_D2024.7 | ||||||||
187178_s_at | |||||||||
A_12_P106208 | |||||||||
Aff_D2024.7 | |||||||||
GPL13394_WBGene00017054 | |||||||||
GPL13914_D2024.7 | |||||||||
GPL14144_D2024.7_11-70_0.913_13_A | |||||||||
GPL14144_D2024.7_348-407_0.899_20_C | |||||||||
GPL14144_D2024.7_555-614_0.885_22_B | |||||||||
GPL19516_CGZ0013801 | |||||||||
GPL19516_CGZ0013802 | |||||||||
GPL21109_D2024.13 | |||||||||
GPL21109_D2024.7.1 | |||||||||
GPL21109_D2024.7.2 | |||||||||
GPL3518_CE04296 | |||||||||
GPL8304_CE_WBGene00017054_A | |||||||||
GPL8673_D2024_7P00265 | |||||||||
GPL8673_D2024_7P00524 | |||||||||
GPL8673_D2024_7P00602 | |||||||||
GPL9450_D2024.7 | |||||||||
cea2.c.27258 | |||||||||
Expression_cluster (134) | |||||||||
Interaction | WBInteraction000151486 | ||||||||
WBInteraction000215297 | |||||||||
WBInteraction000371371 | |||||||||
WBInteraction000387413 | |||||||||
WBInteraction000524867 | |||||||||
WBInteraction000524868 | |||||||||
Map_info | Map | IV | Position | 3.31178 | Error | 0.000439 | |||
Positive | Positive_clone | D2024 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035091 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |