WormBase Tree Display for Gene: WBGene00017054
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| WBGene00017054 | SMap | S_parent | Sequence | D2024 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gstk-2 | Person_evidence | WBPerson1763 | |||||
| Sequence_name | D2024.7 | ||||||||
| Molecular_name | D2024.7 | ||||||||
| D2024.7.1 | |||||||||
| CE04296 | |||||||||
| Other_name | CELE_D2024.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gstk-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 27 Feb 2008 14:43:32 | WBPerson2970 | Name_change | CGC_name | gstk-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gstk | ||||||||
| Allele | WBVar01453040 | ||||||||
| WBVar01453041 | |||||||||
| WBVar01499395 | |||||||||
| WBVar00428356 | |||||||||
| WBVar01499396 | |||||||||
| WBVar00428357 | |||||||||
| WBVar00428358 | |||||||||
| WBVar00428359 | |||||||||
| WBVar00428360 | |||||||||
| WBVar00428361 | |||||||||
| WBVar00264318 | |||||||||
| WBVar01786421 | |||||||||
| WBVar01499633 | |||||||||
| WBVar00920248 | |||||||||
| WBVar00920249 | |||||||||
| WBVar00920250 | |||||||||
| WBVar00920251 | |||||||||
| WBVar00920252 | |||||||||
| WBVar00920253 | |||||||||
| WBVar00920254 | |||||||||
| WBVar00920255 | |||||||||
| WBVar01687987 | |||||||||
| WBVar00920256 | |||||||||
| WBVar00920257 | |||||||||
| WBVar00920258 | |||||||||
| WBVar00920259 | |||||||||
| WBVar00920260 | |||||||||
| WBVar00920261 | |||||||||
| WBVar00920262 | |||||||||
| WBVar00920263 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00014251 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00020314 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | gstk-2 encodes one of two C. elegans kappa class glutathione transferases; while gstk-2(RNAi) animals exhibit no obvious developmental or morphological abnormalities, animals doubly mutant for gstk-2 and gstk-1 exhibit decreased respiration and a lower concentration of the monounsaturated fatty acid cis-vaccenic acid; GSTK-2 is expressed primarily in the pharynx, muscles, and epidermis and localizes to mitochondria. | Paper_evidence | WBPaper00035091 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 14 Aug 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable glutathione peroxidase activity and glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Located in mitochondrion. Expressed in body wall musculature; intestine; and pharynx. Is an ortholog of human GSTK1 (glutathione S-transferase kappa 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D2024.7 | |||||||
| Corresponding_transcript | D2024.7.1 | ||||||||
| Other_sequence | CBC12524_1 | ||||||||
| Associated_feature | WBsf996915 | ||||||||
| WBsf996916 | |||||||||
| WBsf230235 | |||||||||
| WBsf230236 | |||||||||
| WBsf230237 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr8776 | ||||||||
| Expr1021154 | |||||||||
| Expr1037327 | |||||||||
| Expr1147459 | |||||||||
| Expr2012335 | |||||||||
| Expr2030572 | |||||||||
| Drives_construct | WBCnstr00013514 | ||||||||
| WBCnstr00027605 | |||||||||
| Construct_product | WBCnstr00013514 | ||||||||
| WBCnstr00027605 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction | WBInteraction000151486 | ||||||||
| WBInteraction000215297 | |||||||||
| WBInteraction000371371 | |||||||||
| WBInteraction000387413 | |||||||||
| WBInteraction000524867 | |||||||||
| WBInteraction000524868 | |||||||||
| Map_info | Map | IV | Position | 3.31178 | Error | 0.000439 | |||
| Positive | Positive_clone | D2024 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035091 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
