WormBase Tree Display for Gene: WBGene00016918

WBGene00016918 SMap: S_parent: Sequence: C54E4
  Identity: Version: 2
    Name: CGC_name: test-1 Person_evidence: WBPerson105
      Sequence_name: C54E4.2
      Molecular_name: C54E4.2a
        C54E4.2a.1
        CE20611
        C54E4.2c
        CE48553
        C54E4.2c.1
      Other_name: CELE_C54E4.2 Accession_evidence: NDB BX284604
      Public_name: test-1
    DB_info: Database: AceView gene 4C909
        WormQTL gene WBGene00016918
        WormFlux gene WBGene00016918
        NDB locus_tag CELE_C54E4.2
        Panther gene CAEEL|WormBase=WBGene00016918|UniProtKB=H2KZF8
          family PTHR12352
        NCBI gene 177010
        RefSeq protein NM_001027927.6
            NM_001380084.1
        TrEMBL UniProtAcc O44466
            U4PLP4
        UniProt_GCRP UniProtAcc O44466
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 05 Nov 2014 11:16:03 WBPerson2970 Name_change: CGC_name: test-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: test
    Allele (245)
    Strain: WBStrain00032011
      WBStrain00037144
      WBStrain00037172
      WBStrain00054910
    RNASeq_FPKM (74)
    GO_annotation: 00122414
    Ortholog (38)
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Is an ortholog of human SPOCK1 (SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1); SPOCK2 (SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2); and SPOCK3 (SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:684 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11251)
  Molecular_info: Corresponding_CDS: C54E4.2a
      C54E4.2c
    Corresponding_CDS_history: C54E4.2b:wp275
    Corresponding_transcript: C54E4.2a.1
      C54E4.2c.1
    Other_sequence (68)
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00012397 Inferred_automatically: RNAi_primary
      WBRNAi00043155 Inferred_automatically: RNAi_primary
      WBRNAi00089021 Inferred_automatically: RNAi_primary
      WBRNAi00030146 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020841
      Expr1037260
      Expr1147131
      Expr2017375
      Expr2035512
    Microarray_results (27)
    Expression_cluster (193)
    Interaction (31)
  Map_info: Map: IV Position: -9.82537
    Positive: Positive_clone: C54E4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00064099
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene