WormBase Tree Display for Gene: WBGene00016873
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| WBGene00016873 | SMap | S_parent | Sequence | C52B11 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C52B11.4 | ||||||||
| Molecular_name | C52B11.4 | |||||||||
| Other_name | CELE_C52B11.4 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | C52B11.4 | |||||||||
| DB_info | Database | AceView | gene | XB901 | ||||||
| WormQTL | gene | WBGene00016873 | ||||||||
| WormFlux | gene | WBGene00016873 | ||||||||
| NDB | locus_tag | CELE_C52B11.4 | ||||||||
| NCBI | gene | 183716 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 20 May 2019 14:54:37 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele | WBVar02121913 | |||||||||
| WBVar02121914 | ||||||||||
| WBVar00494227 | ||||||||||
| WBVar02048423 | ||||||||||
| WBVar00494228 | ||||||||||
| WBVar01618561 | ||||||||||
| WBVar01499636 | ||||||||||
| WBVar01118742 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00012745 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00044995 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||||
| WBGene00045175 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||||
| WBGene00045009 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||||
| Structured_description | Automated_description | Is affected by several genes including dpy-10; sir-2.1; and pgl-1 based on microarray and RNA-seq studies. Is affected by Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C52B11.4:wp271 | ||||||||
| Corresponding_pseudogene | C52B11.4 | |||||||||
| Other_sequence | MPC00533_1 | |||||||||
| MP00455 | ||||||||||
| Associated_feature | WBsf1003996 | |||||||||
| WBsf1003997 | ||||||||||
| WBsf1003998 | ||||||||||
| WBsf1003999 | ||||||||||
| WBsf1022241 | ||||||||||
| WBsf1022242 | ||||||||||
| WBsf1022243 | ||||||||||
| Experimental_info | Expr_pattern | Expr1013897 | ||||||||
| Expr1146971 | ||||||||||
| Expr2001857 | ||||||||||
| Expr2020083 | ||||||||||
| Drives_construct | WBCnstr00027735 | |||||||||
| Construct_product | WBCnstr00027735 | |||||||||
| Microarray_results | SMD_C52B11.4 | |||||||||
| 172484_x_at | ||||||||||
| 172598_x_at | ||||||||||
| A_12_P140520 | ||||||||||
| Aff_C52B11.4 | ||||||||||
| GPL3518_CE04260 | ||||||||||
| Expression_cluster (28) | ||||||||||
| Interaction (33) | ||||||||||
| Map_info | Positive | Positive_clone | C52B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | X | -18.4604 | ||||||||
| Method | Gene |
