WormBase Tree Display for Gene: WBGene00016835
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| WBGene00016835 | SMap | S_parent | Sequence | C50F2 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C50F2.1 | ||||||||
| Molecular_name | C50F2.1 | |||||||||
| Other_name | CELE_C50F2.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | C50F2.1 | |||||||||
| DB_info | Database | AceView | gene | 1E461 | ||||||
| WormQTL | gene | WBGene00016835 | ||||||||
| WormFlux | gene | WBGene00016835 | ||||||||
| NDB | locus_tag | CELE_C50F2.1 | ||||||||
| NCBI | gene | 183673 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 26 Sep 2019 11:16:21 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (32) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00042481 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00140117 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
| WBGene00078328 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00061477 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00041204 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||||||
| WBGene00041201 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||||||
| Paralog (24) | ||||||||||
| Structured_description | Automated_description | Enriched in ABplpaaaaa and ABprpaaaaa based on single-cell RNA-seq studies. Is affected by several genes including daf-16; eat-2; and sir-2.1 based on tiling array; RNA-seq; and microarray studies. Is affected by eight chemicals including indole; Alovudine; and Zidovudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C50F2.1:wp122 | ||||||||
| C50F2.1:wp273 | ||||||||||
| Corresponding_pseudogene | C50F2.1 | |||||||||
| Experimental_info | Expr_pattern | Expr1011829 | ||||||||
| Expr1146894 | ||||||||||
| Expr2001827 | ||||||||||
| Expr2020053 | ||||||||||
| Drives_construct | WBCnstr00027768 | |||||||||
| Construct_product | WBCnstr00027768 | |||||||||
| Microarray_results (17) | ||||||||||
| Expression_cluster (57) | ||||||||||
| Interaction (182) | ||||||||||
| Map_info | Positive | Positive_clone | C50F2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | I | -1.93433 | ||||||||
| Method | Gene |
