WormBase Tree Display for Gene: WBGene00016729
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| WBGene00016729 | SMap | S_parent | Sequence | C46H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C46H11.3 | |||||||
| Molecular_name | C46H11.3 | ||||||||
| C46H11.3.1 | |||||||||
| CE08785 | |||||||||
| Other_name | CELE_C46H11.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C46H11.3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| Strain | WBStrain00052076 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00000205 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable actin filament binding activity. Predicted to be involved in Arp2/3 complex-mediated actin nucleation and cell migration. Predicted to be located in cytoplasm. Predicted to be part of Arp2/3 protein complex. Human ortholog(s) of this gene implicated in lung squamous cell carcinoma. Is an ortholog of human ARPC5 (actin related protein 2/3 complex subunit 5) and ARPC5L (actin related protein 2/3 complex subunit 5 like). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:708) | ||||
| DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:708) | ||||||
| DOID:3907 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:708) | ||||||
| Molecular_info | Corresponding_CDS | C46H11.3 | |||||||
| Corresponding_transcript | C46H11.3.1 | ||||||||
| Associated_feature | WBsf217615 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00094928 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022829 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042626 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003166 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029879 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014216 | ||||||||
| Expr1146611 | |||||||||
| Expr2001696 | |||||||||
| Expr2019923 | |||||||||
| Drives_construct | WBCnstr00027849 | ||||||||
| Construct_product | WBCnstr00027849 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (41) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Positive | Positive_clone | C46H11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -0.423255 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
