WormBase Tree Display for Gene: WBGene00016716
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WBGene00016716 | SMap | S_parent | Sequence | C46F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | acs-17 | |||||||
Sequence_name | C46F4.2 | ||||||||
Molecular_name | C46F4.2a | ||||||||
C46F4.2a.1 | |||||||||
CE30907 | |||||||||
C46F4.2b | |||||||||
CE53438 | |||||||||
C46F4.2a.2 | |||||||||
C46F4.2b.1 | |||||||||
C46F4.2b.2 | |||||||||
Other_name | dod-9 | ||||||||
CELE_C46F4.2 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | acs-17 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 25 Aug 2004 14:19:09 | WBPerson1971 | Name_change | CGC_name | acs-17 | ||||
Other_name | dod-9 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | acs | ||||||||
Allele (123) | |||||||||
Strain | WBStrain00032076 | ||||||||
Component_of_genotype | WBGenotype00000108 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00003978 | ||||||||
00003979 | |||||||||
00003980 | |||||||||
00003981 | |||||||||
00003982 | |||||||||
00003983 | |||||||||
00003984 | |||||||||
00003985 | |||||||||
00003986 | |||||||||
Ortholog (51) | |||||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Predicted to enable long-chain fatty acid-CoA ligase activity. Predicted to be involved in long-chain fatty acid metabolic process; long-chain fatty-acyl-CoA metabolic process; and neuron differentiation. Predicted to be located in endoplasmic reticulum; lipid droplet; and plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including lung cancer; non-syndromic X-linked intellectual disability 63; and prostate cancer. Is an ortholog of human ACSL3 (acyl-CoA synthetase long chain family member 3) and ACSL4 (acyl-CoA synthetase long chain family member 4). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:10283 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3570) | ||||
DOID:1324 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3570) | ||||||
DOID:0112050 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3571) | ||||||
DOID:2841 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3570) | ||||||
DOID:1059 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3571) | ||||||
DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3570) | ||||||
Molecular_info | Corresponding_CDS | C46F4.2a | |||||||
C46F4.2b | |||||||||
Corresponding_transcript | C46F4.2a.1 | ||||||||
C46F4.2a.2 | |||||||||
C46F4.2b.1 | |||||||||
C46F4.2b.2 | |||||||||
Other_sequence (94) | |||||||||
Associated_feature | WBsf654028 | ||||||||
WBsf237413 | |||||||||
WBsf237414 | |||||||||
WBsf237415 | |||||||||
Experimental_info | RNAi_result | WBRNAi00029871 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012041 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00086462 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102587 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042614 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063179 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00086461 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00086463 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011699 | ||||||||
Expr1037177 | |||||||||
Expr1146596 | |||||||||
Expr2009206 | |||||||||
Expr2027444 | |||||||||
Drives_construct | WBCnstr00027860 | ||||||||
Construct_product | WBCnstr00027860 | ||||||||
Microarray_results (25) | |||||||||
Expression_cluster (237) | |||||||||
Interaction (165) | |||||||||
Map_info | Map | X | Position | -4.03246 | Error | 0.00185 | |||
Positive | Positive_clone | C46F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5103 | |||||||
4317 | |||||||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |