WormBase Tree Display for Gene: WBGene00016716
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| WBGene00016716 | SMap | S_parent | Sequence | C46F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acs-17 | |||||||
| Sequence_name | C46F4.2 | ||||||||
| Molecular_name | C46F4.2a | ||||||||
| C46F4.2a.1 | |||||||||
| CE30907 | |||||||||
| C46F4.2b | |||||||||
| CE53438 | |||||||||
| C46F4.2a.2 | |||||||||
| C46F4.2b.1 | |||||||||
| C46F4.2b.2 | |||||||||
| Other_name | dod-9 | ||||||||
| CELE_C46F4.2 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | acs-17 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Aug 2004 14:19:09 | WBPerson1971 | Name_change | CGC_name | acs-17 | ||||
| Other_name | dod-9 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acs | ||||||||
| Allele (123) | |||||||||
| Strain | WBStrain00032076 | ||||||||
| Component_of_genotype | WBGenotype00000108 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003978 | ||||||||
| 00003979 | |||||||||
| 00003980 | |||||||||
| 00003981 | |||||||||
| 00003982 | |||||||||
| 00003983 | |||||||||
| 00003984 | |||||||||
| 00003985 | |||||||||
| 00003986 | |||||||||
| Ortholog (51) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable long-chain fatty acid-CoA ligase activity. Predicted to be involved in long-chain fatty acid metabolic process; long-chain fatty-acyl-CoA metabolic process; and neuron differentiation. Predicted to be located in endoplasmic reticulum; lipid droplet; and plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including lung cancer; non-syndromic X-linked intellectual disability 63; and prostate cancer. Is an ortholog of human ACSL3 (acyl-CoA synthetase long chain family member 3) and ACSL4 (acyl-CoA synthetase long chain family member 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10283 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3570) | ||||
| DOID:1324 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3570) | ||||||
| DOID:0112050 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3571) | ||||||
| DOID:2841 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3570) | ||||||
| DOID:1059 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3571) | ||||||
| DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3570) | ||||||
| Molecular_info | Corresponding_CDS | C46F4.2a | |||||||
| C46F4.2b | |||||||||
| Corresponding_transcript | C46F4.2a.1 | ||||||||
| C46F4.2a.2 | |||||||||
| C46F4.2b.1 | |||||||||
| C46F4.2b.2 | |||||||||
| Other_sequence (94) | |||||||||
| Associated_feature | WBsf654028 | ||||||||
| WBsf237413 | |||||||||
| WBsf237414 | |||||||||
| WBsf237415 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029871 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012041 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086462 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102587 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042614 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063179 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086461 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086463 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011699 | ||||||||
| Expr1037177 | |||||||||
| Expr1146596 | |||||||||
| Expr2009206 | |||||||||
| Expr2027444 | |||||||||
| Drives_construct | WBCnstr00027860 | ||||||||
| Construct_product | WBCnstr00027860 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (237) | |||||||||
| Interaction (165) | |||||||||
| Map_info | Map | X | Position | -4.03246 | Error | 0.00185 | |||
| Positive | Positive_clone | C46F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5103 | |||||||
| 4317 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005976 | ||||||||
| WBPaper00026800 | |||||||||
| WBPaper00028381 | |||||||||
| WBPaper00029292 | |||||||||
| WBPaper00031648 | |||||||||
| WBPaper00033126 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00051943 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061805 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
