WormBase Tree Display for Gene: WBGene00016667

WBGene00016667 SMap: S_parent: Sequence: C45E5
  Identity: Version: 2
    Name: CGC_name: cpg-18 Paper_evidence: WBPaper00053350
      Sequence_name: C45E5.4
      Molecular_name: C45E5.4
        C45E5.4.1
        CE08732
      Other_name: CELE_C45E5.4 Accession_evidence: NDB BX284604
      Public_name: cpg-18
    DB_info: Database: AceView gene 4G501
        WormQTL gene WBGene00016667
        WormFlux gene WBGene00016667
        NDB locus_tag CELE_C45E5.4
        NCBI gene 183472
        RefSeq protein NM_068453.7
        TREEFAM TREEFAM_ID TF318323
        TrEMBL UniProtAcc Q18642
        UniProt_GCRP UniProtAcc Q18642
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Jun 2020 16:54:31 WBPerson1983 Name_change: CGC_name: cpg-18
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpg
    Allele (31)
    RNASeq_FPKM (74)
    Ortholog: WBGene00039014 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00073103 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00063960 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00162124 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00131360 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP26.g10731 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6367 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16525 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g21552 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7361 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g15489 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g28597 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g20351 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-C45E5.4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold510.g2542 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00363.g10156 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16229 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013589 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_40226000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g10497 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in ABalpppppp; ABpraaappp; OLL; PVD; and pharynx based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including Heme; Mercuric Chloride; and rotenone based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C45E5.4
    Corresponding_transcript: C45E5.4.1
    Other_sequence: CSC00054_1
      FD517304.1
    Associated_feature: WBsf996584
  Experimental_info: RNAi_result: WBRNAi00029832 Inferred_automatically: RNAi_primary
      WBRNAi00011980 Inferred_automatically: RNAi_primary
      WBRNAi00042530 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024756
      Expr1146517
      Expr2001653
      Expr2019879
    Drives_construct: WBCnstr00027904
    Construct_product: WBCnstr00027904
    Microarray_results (19)
    Expression_cluster (167)
    Interaction: WBInteraction000392100
      WBInteraction000421609
      WBInteraction000440451
  Map_info: Positive: Positive_clone: C45E5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 2.25428
  Method: Gene