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WormBase Tree Display for Gene: WBGene00016667

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Name Class

WBGene00016667SMapS_parentSequenceC45E5
IdentityVersion2
NameCGC_namecpg-18Paper_evidenceWBPaper00053350
Sequence_nameC45E5.4
Molecular_nameC45E5.4
C45E5.4.1
CE08732
Other_nameCELE_C45E5.4Accession_evidenceNDBBX284604
Public_namecpg-18
DB_infoDatabaseAceViewgene4G501
WormQTLgeneWBGene00016667
WormFluxgeneWBGene00016667
NDBlocus_tagCELE_C45E5.4
NCBIgene183472
RefSeqproteinNM_068453.7
TREEFAMTREEFAM_IDTF318323
TrEMBLUniProtAccQ18642
UniProt_GCRPUniProtAccQ18642
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
209 Jun 2020 16:54:31WBPerson1983Name_changeCGC_namecpg-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcpg
Allele (31)
RNASeq_FPKM (74)
Ortholog (20)
Structured_descriptionAutomated_descriptionEnriched in ABalpppppp; ABpraaappp; OLL; PVD; and pharynx based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including Heme; Mercuric Chloride; and rotenone based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC45E5.4
Corresponding_transcriptC45E5.4.1
Other_sequenceCSC00054_1
FD517304.1
Associated_featureWBsf996584
Experimental_infoRNAi_resultWBRNAi00029832Inferred_automaticallyRNAi_primary
WBRNAi00011980Inferred_automaticallyRNAi_primary
WBRNAi00042530Inferred_automaticallyRNAi_primary
Expr_patternExpr1024756
Expr1146517
Expr2001653
Expr2019879
Drives_constructWBCnstr00027904
Construct_productWBCnstr00027904
Microarray_results (19)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00036738:500uM_Heme_upregulated
WBPaper00037950:PVD-OLL-neurons_larva_enriched
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00040560:hpl-2_embryo_downregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044030:nhr-8(hd117)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044316:HgCl2_20uM_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044656:tatn-1(qd182)_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048988:neuron_expressed
WBPaper00049377:MWCNT_downregulated
WBPaper00049498:npr-1(ur89)_regulated_7
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
WBPaper00050193:met-2(n4256)set-25(n5021)_downregulated_L1
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050561:indole_10-fold_upregulated
WBPaper00050990:pharynx_enriched
WBPaper00050990:pharynx_expressed
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053402:his-3(RNAi)_upregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00054410:set-26(tm2467)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055648:anterior-head_expressed
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056167:Cry5B_downregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_L1
WBPaper00056169:rrf-3(pk1426)_upregulated_L3
WBPaper00056169:rrf-3(pk1426)_upregulated_L4
WBPaper00056290:mdt-15(mg584)_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00057158:mdt-15(tm2182)_dependent_15C_downregulated
WBPaper00058598:mex-1(or286)_downregulated
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00058927:high-redox-state_downregulated
WBPaper00059191:hsp-16.2p-LIN-29_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059378:lmn-1(Y59C)_upregulated
WBPaper00059527:lsm-1_upregulated_L1
WBPaper00059529:nonu-1(srf0780)_upregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00059987:Wounding_downregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060278:atp-2(RNAi)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061340:Neuroblast_ASE_ASJ_AUA
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:pqn-31-ttr-21
WBPaper00061653:alh-4(hj221)_downregulated
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00061753:csr-1(tor159)_upregulated_20C
WBPaper00061902:camt-1(ok515)_regulated_AFD
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062056:lin-37(n758)_upregulated
WBPaper00062146:MOG-7-degron_1h_regulated
WBPaper00062167:mbl-1(tm1563)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062520:qui-1(db104)_downregulated
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064473:ets-4(rrr16)_upregulated
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_upregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064769:him-17(me24)_upregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065623:62
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065746:tmc-1(rg1003)_upregulated
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065841:9_0
WBPaper00065841:9_1
WBPaper00065841:9_2
WBPaper00065841:15_0
WBPaper00065841:24_0
WBPaper00065841:26_1
WBPaper00065841:27_0
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066204:CdCl2_upregulated_mRNA
cgc4489_group_21
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031703:heme_responsive_7
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00036286:Pattern_I
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00040963:TA200_up
WBPaper00040963:TA300_up
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_24h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
WBPaper00047070:N2_UV_upregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_upregulated_AdultDay2
WBPaper00055899:nitroguanidine_regulated
WBPaper00056330:mrps-5(RNAi)_upregulated
InteractionWBInteraction000392100
WBInteraction000421609
WBInteraction000440451
Map_infoPositivePositive_cloneC45E5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV2.25428
MethodGene