WormBase Tree Display for Gene: WBGene00016657

WBGene00016657 SMap: S_parent: Sequence: C44E12
  Identity: Version: 1
    Name: Sequence_name: C44E12.1
      Molecular_name: C44E12.1
        C44E12.1.1
        CE27852
      Other_name: CELE_C44E12.1 Accession_evidence: NDB BX284606
      Public_name: C44E12.1
    DB_info: Database: AceView gene XI217
        WormQTL gene WBGene00016657
        WormFlux gene WBGene00016657
        NDB locus_tag CELE_C44E12.1
        Panther gene CAEEL|WormBase=WBGene00016657|UniProtKB=Q18621
          family PTHR43808
        NCBI gene 181023
        RefSeq protein NM_076886.8
        TREEFAM TREEFAM_ID TF318487
        TrEMBL UniProtAcc Q18621
        UniProt_GCRP UniProtAcc Q18621
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (48)
    RNASeq_FPKM (74)
    GO_annotation: 00061864
      00122229
    Ortholog (30)
    Paralog: WBGene00003982 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007507 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007508 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007509 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015509 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022176 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable hydrolase activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C44E12.1
    Corresponding_transcript: C44E12.1.1
    Other_sequence: CJC16810_1
      CJC15395_1
      SR00372
      Tcol_isotig12479
      Oden_isotig12266
      FC816547.1
      CBC03619_1
      FC812639.1
      Oden_isotig12265
      FC818986.1
      Dviv_isotig13449
      HC02609
      CJC14902_1
      HC02906
      CGC01175_1
      Acan_isotig21277
      JO472917.1
      Tcir_isotig28161
      FC818289.1
      HCC00615_1
      CR04563
      BXC03769_1
      CRC09541_1
      SRC00941_1
      JI170276.1
      CBC03768_1
    Associated_feature: WBsf716864
      WBsf1005891
      WBsf235958
  Experimental_info: RNAi_result: WBRNAi00089010 Inferred_automatically: RNAi_primary
      WBRNAi00042480 Inferred_automatically: RNAi_primary
      WBRNAi00011949 Inferred_automatically: RNAi_primary
      WBRNAi00029806 Inferred_automatically: RNAi_primary
      WBRNAi00070681 Inferred_automatically: RNAi_primary
      WBRNAi00042481 Inferred_automatically: RNAi_primary
      WBRNAi00070682 Inferred_automatically: RNAi_primary
      WBRNAi00011948 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013307
      Expr1037162
      Expr1146467
      Expr2001630
      Expr2019856
    Drives_construct: WBCnstr00027911
    Construct_product: WBCnstr00027911
    Microarray_results (25)
    Expression_cluster: WBPaper00031040:Cluster_3
      WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:hypodermis_CoreEnriched
      WBPaper00037950:hypodermis_embryo_enriched
      WBPaper00037950:hypodermis_embryo_SelectivelyEnriched
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:hypodermis_larva_SelectivelyEnriched
      WBPaper00037950:intestine_embryo_enriched
      WBPaper00037950:intestine_embryo_SelectivelyEnriched
      WBPaper00038168:lin-15B(n744)_downregulated
      WBPaper00038237:age-1_upregulated_intestine_rescue
      WBPaper00038237:age-1_upregulated_neuron_rescue
      WBPaper00038237:age-1_upregulated_nontransgenic
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00042561:smgl-1(RNAi)_downregulated
      WBPaper00042561:smgl-2(RNAi)_upregulated
      WBPaper00044426:rotenone_5day_downregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045017:blmp-1(tm548)_upregulated
      WBPaper00045050:drh-3 (ne4253)_downregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00046121:ecdoderm_unique
      WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_downregulated
      WBPaper00046337:polysomal_N2_vs_daf-2_downregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00048988:neuron_expressed
      WBPaper00049217:TCER-1_downregulated
      WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
      WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:intestine_enriched
      WBPaper00050990:intestine_expressed
      WBPaper00051245:cytoplasm_specific
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051265:F4_hrde-1(tm1200)_downregulated
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051540:exc-7(csb29);mbl-1(csb30)_upregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053798:nhr-49(nr2041)_tBOOH_upregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055103:thoc-5(wy822)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055482:Tunicamycin_upregulated
      WBPaper00055827:daf-2(e1370)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00055971:nhl-2(ok818)_20C_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056167:ifo-1(kc2)_upregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056218:daf-16(mu86)_upregulated_Day3
      WBPaper00056275:P.aeruginosa_upregulated
      WBPaper00056290:mdt-15(mg584)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00056826:SGP_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058691:set-2(bn129)_upregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059739:hira-1(gk835598)_upregulated_L4
      WBPaper00059824:rnp-6(dh1127)_regulated_OP50
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00059987:Wounding_downregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060634:unc-120(st364)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060703:nas-38(ok3407)_upregulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060909:atfs-1(et18)_upregulated
      WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:hyp7_C_lineage
      WBPaper00061340:P_cell
      WBPaper00061340:Tail_hypodermis
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:C32F10.4-D1086.2
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062118:neural-HSF-1_upregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062293:isp-1(qm150)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062347:blmp-1(tm548)_upregulated
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062715:blmp-1(s71)_upregulated
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064532:pals-25(icb98)_upregulated
      WBPaper00064632:daf-2(e1370)_upregulated_intestine
      WBPaper00064727:daf-2(e1370)_upregulated
      WBPaper00064871:hypoxia_downregulated_F3
      WBPaper00065835:Day5_vs_Day1_downregulated
      WBPaper00065835:Day11_vs_Day1_downregulated
      WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      cgc4386_cluster_3_2
      cgc4489_group_12
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00029437:dcr-1_upregulated
      WBPaper00030985:Serratia_marcesens_upregulated
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00032165:differentially_expressed_with_age_medoid_4
      WBPaper00033099:organophosphorus_pesticide_regulated
      WBPaper00034739:N2lessDR1350
      WBPaper00035227:heat_shock_regulated
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00035873:osm-11_regulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_I
      WBPaper00036375:depleted_in_PVD_OLL
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_prime
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00044091:Bpseudomallei_repressed_12h
      WBPaper00044535:male_downregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5976]:class_1
    Interaction: WBInteraction000007945
      WBInteraction000245570
      WBInteraction000377407
      WBInteraction000458495
      WBInteraction000576225
  Map_info: Positive: Positive_clone: C44E12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -1.47531
  Reference: WBPaper00033099
    WBPaper00065331
  Method: Gene