WormBase Tree Display for Gene: WBGene00016607

WBGene00016607 SMap: S_parent: Sequence: C43E11
  Identity: Version: 1
    Name: Sequence_name: C43E11.9
      Molecular_name: C43E11.9
        C43E11.9.1
        CE08687
      Other_name: CELE_C43E11.9 Accession_evidence: NDB BX284601
      Public_name: C43E11.9
    DB_info: Database: AceView gene 1E836
        WormQTL gene WBGene00016607
        WormFlux gene WBGene00016607
        NDB locus_tag CELE_C43E11.9
        Panther gene CAEEL|WormBase=WBGene00016607|UniProtKB=P91154
          family PTHR23415
        NCBI gene 172028
        RefSeq protein NM_058941.6
        TREEFAM TREEFAM_ID TF300081
        TrEMBL UniProtAcc P91154
        UniProt_GCRP UniProtAcc P91154
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01499919
      WBVar02151302
      WBVar00631367
      WBVar00631368
      WBVar00631369
      WBVar01499786
      WBVar01499985
      WBVar00332173
      WBVar01498959
    RNASeq_FPKM (74)
    GO_annotation: 00050156
      00050157
      00050158
      00050159
      00050160
      00050161
      00050162
      00122188
      00122189
      00122190
    Contained_in_operon: CEOP1172
    Ortholog (35)
    Paralog: WBGene00001051 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022162 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to be located in nucleolus. Predicted to be part of preribosome, large subunit precursor. Is an ortholog of human NIP7 (nucleolar pre-rRNA processing protein NIP7). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C43E11.9
    Corresponding_transcript: C43E11.9.1
    Other_sequence: Tcir_isotig03099
      AA294524.1
      PSC00339_1
      Oden_isotig13070
      Tcol_isotig11618
      GR12461
      EG025420.1
      HG02715
      BMC01197_1
      AW355801.1
      AS07221
      Dviv_isotig04150
      PPC05569_1
      CJC06437_1
      EY469567.1
      Hbac_isotig06037
      CBC02799_1
      CD374761.1
      Tcir_isotig24881
      OVC03931
      EH005411.1
      Acan_isotig08422
      ACC30059_1
      Dviv_isotig04149
      CK854992.1
      Tcir_isotig06385
      HC08048
      Oden_isotig13069
      Tcir_isotig29272
      HBC24395_1
      JI211460.1
      JO471016.1
      OVC00719_1
      GW407857.1
      DI02485
      ES561077.1
      ASC20980_1
      HC07447
      DIC01784_1
      HGC00703_1
      WBC00627_1
      Oden_isotig13068
      TSC12129_1
      Dviv_isotig04151
      BMC12164_1
      AIC00269_1
      HCC08065_1
      Tcol_isotig11619
      Tcir_isotig03098
      CK850461.1
      GRC01375_1
      Name_isotig02186
      EY459803.1
    Associated_feature: WBsf219259
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1024449
      Expr1037131
      Expr1146377
      Expr2001599
      Expr2019823
    Drives_construct: WBCnstr00027942
    Construct_product: WBCnstr00027942
    Microarray_results (17)
    Expression_cluster (135)
    Interaction (257)
  Map_info: Positive: Positive_clone: C43E11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -1.52019
  Reference: WBPaper00034662
    WBPaper00038491
    WBPaper00055090
    WBPaper00061547
    WBPaper00064339
  Method: Gene