WormBase Tree Display for Gene: WBGene00016585
expand all nodes | collapse all nodes | view schema
| WBGene00016585 | SMap | S_parent | Sequence | C42C1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | oac-59 | Person_evidence | WBPerson2553 | |||||
| WBPerson567 | |||||||||
| Sequence_name | C42C1.7 | ||||||||
| Molecular_name | C42C1.7a | ||||||||
| C42C1.7a.1 | |||||||||
| CE46875 | |||||||||
| C42C1.7b | |||||||||
| CE44705 | |||||||||
| C42C1.7b.1 | |||||||||
| Other_name | CELE_C42C1.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | oac-59 | ||||||||
| DB_info | Database | AceView | gene | 4N58 | |||||
| WormQTL | gene | WBGene00016585 | |||||||
| WormFlux | gene | WBGene00016585 | |||||||
| NDB | locus_tag | CELE_C42C1.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016585|UniProtKB=A3QMB6 | |||||||
| family | PTHR23028 | ||||||||
| NCBI | gene | 178180 | |||||||
| RefSeq | protein | NM_001268707.2 | |||||||
| NM_001268708.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF317622 | |||||||
| TrEMBL | UniProtAcc | D3TDG8 | |||||||
| A3QMB6 | |||||||||
| UniProt_GCRP | UniProtAcc | A3QMB6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Sep 2008 16:37:04 | WBPerson2970 | Name_change | CGC_name | oac-59 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | oac | ||||||||
| Allele (110) | |||||||||
| Strain | WBStrain00050910 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004360 | ||||||||
| 00004361 | |||||||||
| 00122160 | |||||||||
| Ortholog (39) | |||||||||
| Paralog (44) | |||||||||
| Structured_description | Automated_description | Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be located in membrane. Expressed in amphid neurons and hypodermis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C42C1.7a | |||||||
| C42C1.7b | |||||||||
| Corresponding_CDS_history | C42C1.7a:wp229 | ||||||||
| Corresponding_transcript | C42C1.7a.1 | ||||||||
| C42C1.7b.1 | |||||||||
| Other_sequence | Tcir_isotig19199 | ||||||||
| Associated_feature (19) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042346 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011864 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9623 | ||||||||
| Expr1012559 | |||||||||
| Expr1146334 | |||||||||
| Expr2014582 | |||||||||
| Expr2032815 | |||||||||
| Drives_construct | WBCnstr00014184 | ||||||||
| WBCnstr00027962 | |||||||||
| Construct_product | WBCnstr00027962 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction | WBInteraction000368613 | ||||||||
| WBInteraction000371992 | |||||||||
| Map_info | Map | IV | Position | 5.83878 | Error | 0.000965 | |||
| Positive | Positive_clone | C42C1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
